Projects in Awesome Lists tagged with leiden-algorithm
A curated list of projects in awesome lists tagged with leiden-algorithm .
https://github.com/cwtsleiden/networkanalysis
Java package that provides data structures and algorithms for network analysis.
clustering clustering-algorithm community-detection java layout layout-algorithm leiden-algorithm louvain-algorithm mapping network-analysis vos-technique
Last synced: 11 Jan 2026
https://github.com/barahona-research-group/PyGenStability
PyGenStability: Multiscale community detection with generalized Markov Stability
clustering community-detection leiden-algorithm louvain-algorithm multiscale python3
Last synced: 01 May 2025
https://github.com/epigen/unsupervised_analysis
A general purpose Snakemake workflow and MrBiomics module to perform unsupervised analyses (dimensionality reduction & cluster analysis) and visualizations of high-dimensional data.
cluster-analysis cluster-validation clustering clustering-algorithm clustree data-science data-visualization densmap dimensionality-reduction heatmap high-dimensional-data leiden-algorithm pca principal-component-analysis snakemake umap unsupervised-learning visualization workflow
Last synced: 15 Apr 2025
https://github.com/neesjanvaneck/networkanalysis-ts
TypeScript port of the Java networkanalysis package that provides data structures and algorithms for network analysis.
clustering clustering-algorithm community-detection layout layout-algorithm leiden-algorithm louvain-algorithm mapping network-analysis typescript vos-technique
Last synced: 27 Feb 2026
https://github.com/xvi-xv-xii-ix-xxii-ix-xiv/xgraph
A comprehensive Rust library providing efficient graph algorithms for solving real-world problems in social network analysis, transportation optimization, recommendation systems, and more
adjacency-matrix bridge-detection community-detection dijkstra directed-graph graph graph-algorithms graph-analysis graph-processing graph-theory heterogeneous leiden-algorithm multigraph rust weighted-graph
Last synced: 12 Jun 2025
https://github.com/gurbaaz27/cs690a-clustering-spatial-transcriptomics-data
Course Assignment on Clustering of Spatial Transcriptomics Data
cancer-genomics clustering computational-biology computational-genomics deep-learning gene-expression k-means-clustering leiden-algorithm louvain-algorithm rna-seq spatial-transcriptomics transcriptomics variational-autoencoder variational-autoencoders variational-inference visium
Last synced: 15 Feb 2026
https://github.com/giatraskon/gastric-cancer-scrnaseq-analysis
Recreation and enrichment of the gastric (GC) cancer single-cell RNA-seq (scRNA-seq) data analysis pipeline described in the "Comprehensive analysis of metastatic gastric cancer tumour cells using single‑cell RNA‑seq" by Wang B. et. al, using the raw counts matrix they provide.
average-linkage bioinformatics clustering gastric-cancer gmm-clustering go-annotation leiden-algorithm louvain-algorithm machine-learning marker-gene-identification pca python sc-rna-seq sc-rna-seq-analysis scanpy single-cell-rna-seq spectral-clustering tsne umap ward-linkage
Last synced: 22 Jul 2025
