https://github.com/andreped/livermask

💥 Command line tool for automatic liver parenchyma and liver vessel segmentation in CT using a pretrained deep learning model

command-line-tool ct deep-learning free-to-use hepatic-veins liver liver-segmentation liver-vessels livermask open parenchyma portal-veins pretrained-models segmentation unet vessels

Last synced: 05 Apr 2025

https://github.com/baderlab/humanliver

R Data: Single cell RNA sequencing of human liver reveals distinct intrahepatic macrophage populations

dataset immunology liver r single-cell

Last synced: 04 Apr 2025

https://github.com/rekalantar/ct_liversegmentation

End-to-end AI Liver Segmentation Network on CT

ct deep-learning liver segmentation semantic-segmentation

Last synced: 05 May 2025

https://github.com/saezlab/hepatic-microenviroment

Gut microbiota fuels HCC development by shaping the hepatic inflammatory microenvironment

cancer hcc liver microbiome r transcriptomics

Last synced: 15 Mar 2025

https://github.com/saezlab/nrf2-activity-in-cld

Hepatocyte-specific NRF2 activation controls fibrogenesis and carcinogenesis in steatohepatitis

liver nafld-cohort transcription-factors

Last synced: 15 Mar 2025

https://github.com/christianholland/cirrhosis-metabolism

bioinformatics liver metabolism transcriptomics

Last synced: 15 Mar 2025