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Projects in Awesome Lists tagged with meta-analysis

A curated list of projects in awesome lists tagged with meta-analysis .

https://github.com/MathiasHarrer/Doing-Meta-Analysis-in-R

[Read-Only] All R code and source files for the online guide "Doing Meta-Analysis with R: A Hands-On Guide"

bookdown meta-analysis network-meta-analysis rstudio systematic-review

Last synced: 30 Jul 2025

https://github.com/phodal/chapi

CHAPI (Common Hierarchical Abstract Parser and Information Converter) streamlines code analysis by converting diverse language source code into a unified abstract model, simplifying cross-language development. Chapi 是一个通用层次抽象解析器与信息转换器，它可以将不同编程语言的源代码转换为统一的层次抽象模型。

meta-analysis meta-data meta-language meta-model meta-programming modeling

Last synced: 15 May 2025

https://github.com/PecanProject/pecan

The Predictive Ecosystem Analyzer (PEcAn) is an integrated ecological bioinformatics toolbox.

bayesian cyberinfrastructure data-assimilation data-science ecosystem-model ecosystem-science forecasting meta-analysis national-science-foundation pecan plants r

Last synced: 07 May 2025

https://github.com/neurostuff/nimare

Coordinate- and image-based meta-analysis in Python

meta-analysis neuroimaging python

Last synced: 01 Apr 2026

https://github.com/canlab/canlabcore

Core tools required for running Canlab Matlab toolboxes. The heart of this toolbox is object-oriented tools that enable interactive analysis of neuroimaging data and simple scripts using high-level commands tailored to neuroimaging analysis.

canlab connectivity fmri machine-learning matlab mediation meta-analysis neuroscience toolboxes

Last synced: 03 May 2026

https://github.com/Aperivue/medsci-skills

Claude Code skills for medical research — literature search, reporting guidelines, statistical analysis, publication figures. Built by a physician-researcher, tested on real publications. MIT licensed.

agent-skills biostatistics claude-code claude-skills clinical-research diagnostic-accuracy irb-protocol literature-review manuscript medical-ai medical-research meta-analysis physician-researcher prisma pubmed radiology reporting-guidelines strobe systematic-review tripod-ai

Last synced: 06 Jun 2026

https://github.com/lisc-tools/lisc

Literature Scanner: Automated collection & analyses of the scientific literature.

literature-mining literature-review meta-analysis scientific-publications text-mining web-scraping

Last synced: 21 Oct 2025

https://github.com/HALFpipe/HALFpipe

ENIGMA HALFpipe is a user-friendly software that facilitates reproducible analysis of fMRI data

bids fmri meta-analysis neuroimaging pipeline reproducibility

Last synced: 01 May 2025

https://github.com/wviechtb/meta_analysis_books

R code for meta-analysis books

meta-analysis r

Last synced: 17 Mar 2026

https://github.com/guido-s/meta

Official Git repository of R package meta

cran meta-analysis r rstudio

Last synced: 06 Apr 2025

https://github.com/krassowski/easy-entrez

Retrieve PubMed articles, text-mining annotations, or molecular data from >35 Entrez databases via easy to use Python package - built on top of Entrez E-utilities API.

entrez entrez-eutilities eutilities gene-annotations literature-mining literature-search meta-analysis pubmed pubmed-central

Last synced: 21 Sep 2025

https://github.com/rmetaverse/metaverse

Package to provide consistent evidence synthesis workflow in R

evidence-synthesis meta-analysis metaverse r systematic-reviews

Last synced: 13 Jul 2025

https://github.com/wwiecek/baggr

R package for Bayesian meta-analysis models, using Stan

bayesian-statistics meta-analysis quantile-regression stan treatment-effects

Last synced: 26 Feb 2026

https://github.com/GerHobbelt/qiqqa-open-source

The open-sourced version of the award-winning Qiqqa research management tool for Windows (a bleeding edge dev fork) ・ ・ ・ ・ ・ ・ ・ ・ ・ ・ ・ ・ ・ ・ ・ ・ ・ ・ ・ ・ ・ ・ ・ ・ ・ ・ ・ ・ ・ ・ ・ ・ ・ ・ ・ ・ ・ ・ ・ ・ ・ ・ ・ ・ ・ ・ ☞☞☞ File any issues you find in the main repo issue tracker at https://github.com/jimmejardine/qiqqa-open-source/issues

citations document-classification document-management meta-analysis metadata mupdf pdf qiqqa tesseract

Last synced: 08 Apr 2025

https://github.com/mathiasharrer/dmetar

Official repository for the "dmetar" R package. [Read-Only]

meta meta-analysis metafor netmeta r-package systematic-review

Last synced: 08 Apr 2025

https://github.com/kylehamilton/mavis

MAVIS: Meta Analysis via Shiny

cran effect-size meta-analysis shiny

Last synced: 20 Mar 2025

https://github.com/guido-s/netmeta

Official Git repository of R package netmeta

cran meta-analysis network-meta-analysis r rstudio

Last synced: 05 Apr 2025

https://github.com/zhanxw/seqminer

Query sequence data (VCF/BCF1/BCF2, Tabix, BGEN, PLINK) in R

annotation bcf bgen meta-analysis next-generation-sequencing plink sequencing tabix vcf workflow

Last synced: 18 Feb 2026

https://github.com/wviechtb/metadat

Meta-analytic datasets for R

dataset datasets meta-analysis r r-package

Last synced: 05 Apr 2025

https://github.com/danheck/metabma

Bayesian Model Averaging for Random and Fixed Effects Meta-Analysis

bayes bayes-factor bayesian-inference evidence-synthesis meta-analysis model-averaging r stan

Last synced: 16 Mar 2025

https://github.com/novartis/rbest

Tool-set to support Bayesian evidence synthesis in R

bayesian clinical historical-data meta-analysis

Last synced: 21 Jul 2025

https://github.com/strengejacke/esc

Effect Size Computation for Meta Analysis

effect-size meta-analysis r

Last synced: 16 Mar 2025

https://github.com/kylehamilton/major

Meta-Analysis for JAMOVI

jamovi meta-analysis

Last synced: 20 Mar 2025

https://github.com/aebilgrau/gmcm

Unsupervised Clustering and Meta-analysis using Gaussian Mixture Copula Models

clustering cran gaussian-mixture-models meta-analysis r rank unsupervised-cluster-analysis

Last synced: 15 Jul 2025

https://github.com/kylehamilton/jamovimeta

Meta-Analysis for JAMOVI

jamovi meta-analysis r

Last synced: 20 Mar 2025

https://github.com/jongheepark/poll-mbc

MBC 20대 대선 여론조사를 조사하다

bayesian meta-analysis polling prediction president-approval

Last synced: 03 Aug 2025

https://github.com/cran-task-views/metaanalysis

CRAN Task View: Meta-Analysis

cran meta-analysis r rstats task-views

Last synced: 13 Apr 2025

https://github.com/nealhaddaway/predicter

A Tool to Estimate the Time Needed to Conduct a Systematic Review or Systematic Map

evidence-synthesis literature-review meta-analysis planning scoping-review systematic-mapping systematic-review systematic-reviews

Last synced: 13 May 2025

https://fbartos.github.io/RoBMA/

RoBMA R package for estimating robust Bayesian meta-analyses

meta-analysis model-averaging publication-bias

Last synced: 04 May 2026

https://github.com/guido-s/metasens

Official Git repository of R package metasens

adjustment cran meta-analysis publication-bias r rstudio

Last synced: 09 Mar 2026

https://github.com/metapsy-project/metapsyTools

Read-only repository for the package "metapsyTools".

meta-analysis psychotherapy r-package

Last synced: 07 May 2025

https://github.com/andre-inter-collab-llc/research-workflow-assistant

Open-source AI research assistant for VS Code + GitHub Copilot. Connects to PubMed, OpenAlex, Semantic Scholar, Europe PMC, CrossRef, and Zotero via MCP servers. Custom agents guide systematic reviews, academic writing, data analysis, and project management — all ICMJE-compliant with full audit trails.

academic-writing crossref europe-pmc github-copilot icmje literature-review mcp-server meta-analysis model-context-protocol openalex prisma pubmed quarto reference-management reproducible-research research-assistant semantic-scholar systematic-review vscode zotero

Last synced: 06 Apr 2026

https://github.com/nealhaddaway/livingprismaflow

Produce living systematic review flow diagrams that conform to PRISMA checklist standards

evidence-synthesis literature-review living-review living-systematic-review meta-analysis prisma reporting systematic-review systematic-reviews

Last synced: 01 Jul 2025

https://github.com/achillesrasquinha/16smart

16s rRNA Sequencing Meta-analysis Reproducibility Tool (using mothur).

16s-rrna bioinformatics meta-analysis mothur python reproducible-research sequencing

Last synced: 06 May 2025

https://github.com/shixiangwang/metawho

:package: An R package implementing deft approach for meta analysis

deft-approach meta-analysis r-package subgroup-analysis

Last synced: 12 Apr 2025

https://github.com/bhklab/metagx

Scripts to perform meta-analysis of cancer gene expression datasets

gene-expression meta-analysis

Last synced: 13 Apr 2025

https://github.com/mathiasharrer/metapsyr

MetaPsyR: Access the Meta-Analytic Psychotherapy Database

depression meta-analysis psychotherapy r-package

Last synced: 06 Oct 2025

https://github.com/mcguinlu/prisma-checklist

This repo contains the code supporting the PRISMA 2020 Checklist web app.

meta-analysis prisma reporting-standards systematic-reviews

Last synced: 13 Oct 2025

https://github.com/neelsoumya/dssurvival

Survival functions for DataSHIELD. Package for building survival models, Cox proportional hazards models and Cox regression models in DataSHIELD.

clinical-informatics cox-models cox-regression datashield datashield-technical-team datashield-testing dssurvival meta-analysis r survival-analysis survival-functions survival-models

Last synced: 25 Apr 2025

https://github.com/pharmcat/forestplot.jl

A simple package to draw forest plots for meta-analysis study

forestplot julia meta-analysis plots

Last synced: 05 Apr 2025

https://github.com/guido-s/diagmeta

Official Git repository for R package diagmeta

cran diagnostic-accuracy-studies meta-analysis r rstudio

Last synced: 28 Apr 2025

https://github.com/dhimmel/stargeo

Generating expression signatures for disease using STARGEO

diseases gene-expression hetionet meta-analysis microarray-data rephetio stargeo transcriptomics

Last synced: 23 Mar 2025

https://github.com/neelsoumya/dssurvivalshiny

This is a package with miscellaneous tools, a set of computational tools and a graphical user interface (GUI) for privacy preserving federated survival model meta-analysis using the DataSHIELD platform. The primary function is to enable data and model documentation.

clinical-informatics clinical-information-system data-documentation datashield meta-analysis

Last synced: 02 Jan 2026

https://github.com/danilofreire/legislature-size-meta-analysis

Replication materials for the paper "The Effect of Legislature Size on Public Spending: A Meta-Analysis" (2022)

distributive-politics law-of-1n legislature-size meta-analysis political-science public-spending

Last synced: 14 May 2025

https://github.com/callahantiff/ignorenet

identifying and annotating uninvestigated disease-associated genes

disease-gene-association gene-expression linked-open-data meta-analysis

Last synced: 21 Jan 2026

https://github.com/nicholaswunz/bpa-meta-analysis

Paper - Effect of the plastic pollutant bisphenol A on the biology of aquatic organisms: A meta-analysis

aquatic-organisms bpa ecotoxicology life-history meta-analysis plastic-pollution

Last synced: 06 Feb 2026

https://github.com/metapsy-project/metapsyDocs

Repository of the Metapsy documentation website

documentation meta-analysis psychotherapy

Last synced: 07 May 2025

https://github.com/amirmasoudabdol/sam

SAM is a modular, flexible, and extensible simulation framework for systematically studying researcher's questionable research practices as well as journal's questionable review practices.

agent-based-simulation meta-analysis monte-carlo-simulation questionable-research-practices simulation simulation-framework

Last synced: 20 Jul 2026

https://github.com/ayushnoori/nd-diff-expr

Differential gene expression data from the human central nervous system across Alzheimer’s disease, Lewy body diseases, and ALS-FTD.

differential-expression meta-analysis neurodegeneration transcriptomics

Last synced: 19 Feb 2026

https://github.com/ucl/metafloat

Estimation of covariate interactions and subgroup-specific treatment effects in meta-analysis.

meta-analysis randomized-controlled-trials stata subgroups

Last synced: 14 Feb 2026

https://github.com/bmascat/meta-analysis-alms

Frequentist analysis of the genotype-phenotype associations in patients with Alström syndrome

alms1 ciliopathy meta-analysis

Last synced: 18 Mar 2025

https://github.com/neelsoumya/metaanalysis_models

Resources and code for meta-analysis models

meta-analysis metafor

Last synced: 20 Jun 2025

https://github.com/horberlan/forest-plot

Forest Plot - Meta analysis with the meta package in R :bar_chart:

forest meta-analysis metadata rstudio subgroups

Last synced: 04 Apr 2025

https://github.com/katerina-pap/ma-cont-shiny-app

Repository for R Shiny app: https://katerina-pap.shinyapps.io/MA-cont-prepostES/

ancova meta-analysis r shiny

Last synced: 16 Jul 2026

https://github.com/ucl/ipdmetan

Two-stage meta-analysis of Individual Participant Data (IPD)

individual-participant-data individual-patient-data ipd meta-analysis stata two-stage

Last synced: 15 Feb 2026

https://github.com/saezlab/liver-disease-atlas

Transcriptomic cross-species analysis of chronic liver disease reveals consistent regulation between humans and mice

bioinformatics liver-disease meta-analysis transcriptomics workflowr

Last synced: 15 Mar 2025

https://github.com/pierremasselot/mcc-pmtoxicity

A multi-country analysis of differential PM2.5-related mortality risks by pollutant mixture complexity

air-pollution analysis dlm mcc meta-analysis mortality time-series

Last synced: 22 Jul 2026

https://github.com/irissun/detectnorm

Detect non-normality of primary studies in meta-analysis

meta-analysis non-normality

Last synced: 19 Feb 2026

https://github.com/nicholaswunz/dispersal-meta-analysis

Paper - Physiology can predict animal activity, exploration, and dispersal

climate-change energetics locomotor meta-analysis metabolism performance

Last synced: 06 Feb 2026

https://github.com/jinghuazhao/scallop-seq

Single point and rare variant analysis for the SCALLOP-Seq analysis

meta-analysis olink proteomics wes wgs

Last synced: 20 May 2026

https://github.com/lukaseamus/msc

Data and R code accompanying the poster "Uniting seagrass conservation and tourism in Mauritius".

economics esc forcats ggplot2 law legislation mapping marine-biology marine-ecology marine-planning mauritius meta meta-analysis policy poster qgis r seagrass tourism vegetated-habitats

Last synced: 16 Feb 2026

https://github.com/amirmasoudabdol/bilbo

Documentation for SAM simulation framework and its companion, Frodo!

meta-analysis monte-carlo-simulation questionable-research-practices simulation-framework

Last synced: 05 Mar 2026

https://github.com/mahmood726-cyber/ubcma

UBCMA: Unified Bias-Calibrated Meta-Analysis via Joint Heterogeneity-Selection Modeling

bayesian e156 evidence-synthesis mcmc meta-analysis pymc

Last synced: 23 Jul 2026

https://github.com/mahmood726-cyber/metashift

MetaShift: Changepoint Detection Reveals Hidden Regime Shifts in Cumulative Meta-Analysis

browser-tool e156 evidence-synthesis meta-analysis shift-analysis

Last synced: 23 Jul 2026

https://github.com/mahmood726-cyber/evidence-collider

Maps clinical trial density (from the AACT ClinicalTrials.gov mirror) against global disease burden (IHME SDI) to surface "research deserts" — geographies where burden is high but trial activity is low.

aact clinical-trials e156 evidence-synthesis global-health meta-analysis

Last synced: 23 Jul 2026

https://github.com/mahmood726-cyber/rapidmeta-kit

Full interactive RapidMeta meta-analysis dashboard from a tiny JSON config: edit ~20 lines, run one command, get the complete workbench (screening, extraction, 28-panel stats, GRADE, WebR, PRISMA) running offline. Built for low-API-quota use (Gemini CLI free tier).

evidence-synthesis meta-analysis offline-first rapidmeta systematic-review

Last synced: 23 Jul 2026

https://github.com/mahmood726-cyber/rmst-meta

RMST Meta: A Browser Tool for Meta-Analysis of Restricted Mean Survival Time Beyond the Hazard Ratio

browser-tool e156 evidence-synthesis meta-analysis rmst survival-analysis

Last synced: 23 Jul 2026

https://github.com/mahmood726-cyber/gemini-rigor-framework

A high-performance engineering and visualization harness for autonomous AI research agents.

ai-rigor e156 evidence-synthesis framework meta-analysis

Last synced: 23 Jul 2026

https://github.com/mahmood726-cyber/esc-acs-living-meta

Shared cardiovascular living meta-analysis app with topic-aware reviewer validation and observed-N GRADE logic

cardiovascular evidence-synthesis grade meta-analysis web-r

Last synced: 23 Jul 2026

https://github.com/mahmood726-cyber/prognostic-meta

PrognosisMeta: Browser-Based Prognostic Meta-Analysis Engine

browser-tool e156 evidence-synthesis hazard-ratio meta-analysis prognostic-meta-analysis

Last synced: 23 Jul 2026

https://github.com/agbarnett/network.meta.analysis

WinBUGS code to run a network meta-analysis

meta-analysis winbugs

Last synced: 21 Feb 2026

https://github.com/fdecunta/minter

Effect sizes for meta-analysis of interactions. A collection of functions for computing effect sizes from factorial experiments.

ecology effect-sizes factorial interactions meta-analysis non-independence

Last synced: 19 Feb 2026

https://github.com/ucl/metan

Fixed and random effects meta-analysis of aggregate data

meta-analysis stata

Last synced: 22 Feb 2026

https://github.com/mikhaeelatefrizk/affect-labeling-review

Systematic review and meta-analysis of affect labeling (Lieberman et al. 2007 paradigm). Pre-registered protocol, real random-effects meta-analysis (k=9), PRISMA 2020, RoB 2 / ROBINS-I, ~14,000-word manuscript. Open data and code.

affect-labeling amygdala clinical-psychology emotion-regulation meta-analysis neuroscience open-science prefrontal-cortex preregistration prisma-2020 psychology psychophysiology replication-crisis skin-conductance systematic-review

Last synced: 26 Jun 2026

https://github.com/kevcaz/graphsmetaanalyses

:book: metaAnalyses - QCBS - visualization

meta-analysis qcbs r visualization

Last synced: 20 May 2026

https://github.com/fabioc-aloha/lithium

Research project investigating lithium deficiency as a contributor to Alzheimer's disease and low-dose lithium orotate supplementation for cognitive protection. Includes Phase 1 clinical trial documentation, IRB protocols, evidence synthesis, and literature review based on 2025 Nature findings.

alzheimers-disease clinical-trial clinical-trials cognitive-protection dementia-prevention dementia-research evidence-synthesis lithium lithium-orotate mental-health-research meta-analysis neuroprotection neuroscience research-protocol systematic-review

Last synced: 30 May 2026

https://github.com/ccrisc/metaanalysis

A meta-analysis whether an increase in minimum wage compress wage inequality.

data-analysis-r learn meta-analysis statistics

Last synced: 23 Aug 2025

https://github.com/cpernet/meta_meditation

raw metadata files, scripts and derived files for 'Mindfulness related changes in grey matter: A Systematic Review and Meta-analysis'

meditation meta-analysis mri-brain systematic-reviews

Last synced: 05 Oct 2025

https://github.com/mahmood726-cyber/cardio-ctgov-living-meta-portfolio

Generated cardiovascular ClinicalTrials.gov living meta portfolio with topic-aware reviewer packs and validation output

cardiovascular clinicaltrials-gov evidence-synthesis meta-analysis systematic-review

Last synced: 23 Jul 2026

https://github.com/lytello/suicide-previously-incarcerated

Systematic review and meta-analysis workflow documentation

html meta-analysis public-health r suicide-prevention systematic-review

Last synced: 02 Apr 2025

https://github.com/sourceduty/metadata_generator

📄 Generate and analyze metadata using uploaded files. Create knowledge tags and meta-information reports.

ai artificial-intelligence chatgpt knowledge-tagging knowledge-tags meta meta-analysis meta-data meta-info meta-information meta-tag metadata metainformation openai

Last synced: 08 Aug 2025

https://github.com/mahshaaban/intro_meta_r

Introduction to meta analysis in R

meta-analysis r

Last synced: 26 Feb 2025

https://github.com/jcaperella29/meta_analysis-on-rna_seq-data-using-metaseq

An R script that performs Meta_analysis on RNA_seq data from multiple studies

bioinformatics meta-analysis rna-seq

Last synced: 09 Jul 2026

https://github.com/fonnesbeck/uterine_fibroids_ma

Meta-analysis of uterine fibroids treatment outcomes

clinical-research meta-analysis pymc3 python statistics

Last synced: 08 May 2026