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Projects in Awesome Lists tagged with mirna
A curated list of projects in awesome lists tagged with mirna .
https://github.com/lpantano/seqcluster
small RNA analysis from NGS data
mirna report sequencing smallrna trna
Last synced: 13 Oct 2024
https://github.com/altaschen/mirtards
miRTarDS is a microRNA target interaction database, including 1,220,904 MTIs from miRTarbase, miRDB, miRWalk, involving 6,085 genes and 1,261 pre-miRNAs. The MTIs prediction achieved an F1 score of 88% in accurately distinguishing protein-level experimentally validated MTIs and predicted MTIs.
bioinformatics database microrna-target-prediction mirna
Last synced: 13 Oct 2024
https://github.com/lpantano/isomirs
analyze isomiRs from seqbuster tool
analyze-isomirs bioconductor isomirs mirna r
Last synced: 27 Oct 2024
https://github.com/lpantano/seqclusterviz
visualization of seqcluster output, try at:
mirna smallrna smallrna-seq trna-derived-small-rna visualization
Last synced: 13 Oct 2024
https://github.com/yanndubs/mirnaseq-analysis
Analyze single-cell miRNA sequencing data from HL-60 cells along a 7-day time-course of ATRA treatment.
atra-treatment bioinformatics mirna mirnaseq-analysis rna-seq
Last synced: 13 Oct 2024
https://github.com/selcenari/cernanetsim
Simulation of interactions miRNA:Competing Targets
cerna mirna network-biology network-simulator r tcga tidygraph tidyverse
Last synced: 14 Oct 2024
https://github.com/llrs/mirna-ha
Efforts to relate miRNA from blood to clinical variables from alcoholic hepatitis
Last synced: 05 Nov 2024
