Projects in Awesome Lists tagged with mlst
A curated list of projects in awesome lists tagged with mlst .
https://github.com/kjolley/BIGSdb
Bacterial Isolate Genome Sequence Database (BIGSdb): A platform for gene-by-gene bacterial population annotation and analysis.
bacteria bioinformatics database genomes mlst typing
Last synced: 30 Mar 2025
https://github.com/aleimba/bac-genomics-scripts
Collection of scripts for bacterial genomics
annotation bioinformatics bioperl blast computational-biology genomics microbial-genomics microbiology mlst ngs opensource perl science scripts-collection sequencing unix
Last synced: 02 Apr 2025
https://github.com/bu-isciii/taranys
cg/wgMLST allele calling software, schema evaluation and allele distance estimation for outbreak reserch.
bacterial-genomes cgmlst mlst outbreak-data-analysis outbreak-detection sequencing wgmlst
Last synced: 05 Apr 2025
https://github.com/npavlovikj/mlst_stringmlst_analyses
Scripts used to generate the analyses and figures in the paper "Systems-based approach for optimization of a scalable bacterial ST mapping assembly-free algorithm".
bioinformatics bioinformatics-pipeline mlst stringmlst
Last synced: 24 Mar 2025
