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Projects in Awesome Lists tagged with multiomics
A curated list of projects in awesome lists tagged with multiomics .
https://github.com/theislab/scarches
Reference mapping for single-cell genomics
batch-correction data-integration deep-learning human-cell-atlas multimodal-deep-learning multiomics rna-seq-analysis scrna-seq single-cell single-cell-genomics
Last synced: 28 Nov 2024
https://github.com/pinellolab/pyrovelocity
𝒫robabilistic modeling of RNA velocity ⬱
cell-fate-determination deep-generative-model developmental-trajectories multiomics probabilistic-models probabilistic-programming pyro rna-splicing rna-splicing-analysis rna-velocity rna-velocity-estimation single-cell-genomics single-cell-multiomics single-cell-rna-seq transcriptomics
Last synced: 14 Nov 2024
https://github.com/omicsdi/ddir
An R package to access to Omics Discovery Index API
multiomics omicsdi r rest-client
Last synced: 11 Dec 2024
https://github.com/omicsdi/ddipy
OmicsDI Rest API client in Python
data-science multiomics omicsdi python-3 rest-client
Last synced: 02 Dec 2024
https://github.com/mvinyard/cell-tools
Single-Cell Data Analysis Tools
multiomics python pytorch scatac-seq scrna-seq single-cell
Last synced: 01 Oct 2024
https://github.com/ypriverol/annotator
SDRF for proteomics annotator
metadata multiomics proteomics sdrf
Last synced: 14 Nov 2024
https://github.com/llrs/sgcca_hyperparameters
Evaluating the effect of SGCCA hyperparameters
cca generalized-cca integration multiomics n-integration
Last synced: 22 Dec 2024
https://github.com/bmascat/rna-seq-proteomics-pipeline
Multi-omics analysis of LFQ proteomics and transcriptomics of an ALMS1 gene knockout cell model after TGF-B pathway stimulation.
crispr data-integration enrichment-analysis multiomics proteomics rna-seq
Last synced: 24 Nov 2024
https://github.com/ypriverol/sdrfcheck-api
A flask API for the SDRF annotator tool
Last synced: 14 Nov 2024