Projects in Awesome Lists tagged with namd
A curated list of projects in awesome lists tagged with namd .
https://github.com/Colvars/colvars
Collective variables library for molecular simulation and analysis programs
collective-variables enhanced-sampling free-energy gromacs lammps molecular-dynamics namd simulation tinkerhp vmd
Last synced: 10 May 2025
https://github.com/MDAnalysis/imd-workshop-2024
Materials for the virtual 2024 MDAnalysis IMD streaming workshop.
gromacs lammps mdanalysis namd python streaming
Last synced: 23 Apr 2025
https://github.com/mdanalysis/imd-workshop-2024
Materials for the virtual 2024 MDAnalysis IMD streaming workshop.
gromacs lammps mdanalysis namd python streaming
Last synced: 12 Apr 2025
https://github.com/adam-maz/toolkit-for-namd
I present tools that accelerate molecular dynamics (MD) simulations using NAMD software and support the analysis of the obtained trajectories.
bash charmm-gui clusterization gpu-acceleration k-means-clustering medicinal-chemistry molecular-dynamics namd python vmd
Last synced: 15 Mar 2025
