Projects in Awesome Lists tagged with network-science

https://github.com/benedekrozemberczki/pytorch_geometric_temporal

PyTorch Geometric Temporal: Spatiotemporal Signal Processing with Neural Machine Learning Models (CIKM 2021)

deep-learning gcn gnn graph-convolution graph-convolutional-networks graph-embedding graph-neural-networks network-embedding network-science node-embedding pytorch spatial-analysis spatial-data spatio-temporal-analysis spatio-temporal-data spatiotemporal temporal-data temporal-graphs temporal-networks

Last synced: 23 Apr 2025

https://github.com/benedekrozemberczki/karateclub

Karate Club: An API Oriented Open-source Python Framework for Unsupervised Learning on Graphs (CIKM 2020)

2vec community-detection deepwalk gcn graph-clustering graph-embedding graph2vec label-propagation louvain machine-learning network-embedding network-science networkx networkx-graph node-embedding node2vec scikit sklearn supervised-learning unsupervised-learning

Last synced: 14 May 2025

https://github.com/paulbrodersen/netgraph

Publication-quality network visualisations in python

graph graph-tool igraph matplotlib network network-analysis network-science networkx publication-quality-plots python visualization

Last synced: 06 Apr 2026

https://github.com/scikit-mobility/scikit-mobility

scikit-mobility: mobility analysis in Python

complex-systems data-analysis data-science human-mobility mobility-analysis mobility-flows network-science risk-assessment scikit-mobility statistics synthetic-flows

Last synced: 21 Oct 2025

https://github.com/benedekrozemberczki/littleballoffur

Little Ball of Fur - A graph sampling extension library for NetworKit and NetworkX (CIKM 2020)

community-structure deep-learning forest-fire graph graph-algorithms graph-embedding graph-sampling graph-sparsification machine-learning metropolis-hastings minimum-spanning-tree network-analytics network-embedding network-sampling network-science networkx node-embedding random-walk sampling

Last synced: 08 Apr 2025

https://github.com/benedekrozemberczki/datasets

A repository of pretty cool datasets that I collected for network science and machine learning research.

benchmark community-detection data-science dataset deepwalk dimensionality-reduction gcn gnn graph-convolution graph-embedding graph-neural-network graph2vec link-prediction machine-learning network-analysis network-embedding network-science node-classification node-embedding node2vec

Last synced: 13 Feb 2026

https://github.com/CambridgeUniversityPress/FirstCourseNetworkScience

Tutorials, datasets, and other material associated with textbook "A First Course in Network Science" by Menczer, Fortunato & Davis

datasets indiana-university network-science networkx python social-network textbook tutorials

Last synced: 27 Sep 2025

https://cambridgeuniversitypress.github.io/FirstCourseNetworkScience/

Tutorials, datasets, and other material associated with textbook "A First Course in Network Science" by Menczer, Fortunato & Davis

datasets indiana-university network-science networkx python social-network textbook tutorials

Last synced: 26 Apr 2025

https://github.com/HGX-Team/hypergraphx

HGX is a multi-purpose, open-source Python library for higher-order network analysis

graph-algorithms hypergraphs network-science

Last synced: 01 May 2025

https://github.com/varoudis/depthmapx

depthmapX is a multi-platform Spatial Network Analysis Software

agent-based-modeling agent-based-simulation architecture c-plus-plus design-tools graph-algorithms graph-analysis linux macosx network-analysis network-science qt space-syntax spatial-analysis spatial-statistics urban-design urban-planning visibility-analysis visibility-graph windows

Last synced: 20 Jun 2025

https://github.com/xgi-org/xgi

CompleX Group Interactions (XGI) is a Python package for higher-order networks.

higher-order higher-order-networks hypergraphs network-science

Last synced: 01 May 2025

https://github.com/benedekrozemberczki/role2vec

A scalable Gensim implementation of "Learning Role-based Graph Embeddings" (IJCAI 2018).

deep-learning deepwalk gensim graph-embedding graph-neural-network graph-wavelet implicit-factorization machine-learning network-embedding network-science node-embedding node2vec pytorch representation-learning research sklearn struc2vec tensorflow weisfeiler-lehman word2vec

Last synced: 07 Jul 2025

https://github.com/Ashish7129/Graph_Sampling

Graph Sampling is a python package containing various approaches which samples the original graph according to different sample sizes.

big-data big-data-analytics breadth-first-search data-mining graphs induction network network-analysis network-science networkx python random-walk sample sampling social-network-analysis subgraph

Last synced: 19 Jul 2025

https://github.com/juliagraphs/multilayergraphs.jl

A Julia package for the creation, manipulation and analysis of the structure, dynamics and functions of multilayer graphs.

complex-networks complex-systems discrete-mathematics graph graph-algorithms graph-theory graph-theory-algorithms graph-theory-analysis graphs julia julia-language julia-package multilayer-graphs multilayer-network multilayer-networks multiplex-networks network network-analysis network-science networks

Last synced: 21 Sep 2025

https://github.com/jkbren/einet

Uncertainty and causal emergence in complex networks

causal-emergence information-theory network-science scale

Last synced: 15 Mar 2025

https://github.com/benedekrozemberczki/tigerlily

TigerLily: Finding drug interactions in silico with the Graph.

biology ddi deep-learning drug-drug-interaction embedding gradient-boosting graph graph-database graph-embedding graph-machine-learning heterogeneous-graph knowledge-graph machine-learning network-science node node-embedding pharmaceuticals tigergraph unsupervised-learning

Last synced: 11 Apr 2025

https://github.com/mdeff/ntds_2019

Material for the EPFL master course "A Network Tour of Data Science", edition 2019.

data-science education epfl graph-neural-networks graphs network-science

Last synced: 01 Aug 2025

https://github.com/mdeff/ntds_2017

Material for the EPFL master course "A Network Tour of Data Science", edition 2017.

data-science education epfl graphs network-science

Last synced: 06 Jul 2025

https://github.com/benedekrozemberczki/pdn

The official PyTorch implementation of "Pathfinder Discovery Networks for Neural Message Passing" (WebConf '21)

bert cheminformatics data-science deep-learning deepwalk gcn gnn gpt-3 graph-classification graph-neural-network graph2vec message-passing molecules multiplex network-science neural-message-passing node-classification pathfinder pytorch transformer

Last synced: 11 Apr 2025

https://github.com/mdeff/ntds_2018

Material for the EPFL master course "A Network Tour of Data Science", edition 2018.

data-science education epfl graphs network-science

Last synced: 12 Jul 2025

https://github.com/graph-com/graphmaker

[TMLR] GraphMaker: Can Diffusion Models Generate Large Attributed Graphs?

ddpm generative-model graph-generation graph-neural-networks network-science node-classification pytorch social-network synthetic-data-generation

Last synced: 12 May 2025

https://github.com/ingoscholtes/kdd2018-tutorial

Companion repository for the KDD'18 hands-on tutorial on Higher-Order Data Analytics for Temporal Network Data

data-analytics data-science graph-mining higher-order-models network-science

Last synced: 11 Oct 2025

https://github.com/katolaz/netbunch

Software for complex network analysis -- see www.complex-networks.net

complex-networks complex-systems graph-algorithms network-algorithms network-science

Last synced: 04 Mar 2026

https://github.com/erictleung/data-science-resources

:earth_americas: Readings and resource materials for data science

bioinformatics computational-biology linear-algebra machine-learning network-science statistical-learning statistical-methods statistics

Last synced: 27 Feb 2026

https://github.com/danlessa/coursera-networkx

Notebooks used in the Network Data Science with NetworkX and Python guided course

course-project coursera data-science network-science networkx

Last synced: 10 Oct 2025

https://github.com/benedekrozemberczki/orbitalfeatures

A sparsity aware implementation of "Biological Network Comparison Using Graphlet Degree Distribution" (Bioinformatics 2007)

bioinformatics centrality clustering-coefficient complex-networks data-science deepwalk feature-extraction graph-classification graph-enumeration graphlet machine-learning motif network-science node-classification node-embedding node2vec orbit research role2vec sklearn

Last synced: 21 Jun 2025

https://github.com/benedekrozemberczki/resolutions-2019

A list of data mining and machine learning papers that I implemented in 2019.

attention-mechanism deep-learning deepwalk gcn graph-classification graph-clustering graph-convolutional-networks graph-embedding graph-kernel machine-learning network-embedding network-science node-classification node-embedding node2vec pytorch resolution scipy sklearn tensorflow

Last synced: 11 Apr 2025

https://github.com/mims-harvard/pathways

Disease pathways in the human interactome

interactome molecular-biology network-analysis network-science pathway-analysis pathway-prediction

Last synced: 10 Oct 2025

https://github.com/anty-filidor/network_diffusion

Python package for simulating spreading phenomena in complex networks

diffusion influence-maximization multilayer-networks network-science networkx simulator spreading temporal-networks

Last synced: 04 Mar 2026

https://github.com/ragibson/modularitypruning

Pruning tool to identify small subsets of network partitions that are significant from the perspective of stochastic block model inference. This method works for single-layer and multi-layer networks, as well as for restricting focus to a fixed number of communities when desired.

community-detection graph-theory modularity multilayer-networks network-graph network-science pruning stochastic-block-model

Last synced: 22 Apr 2025

https://github.com/cdpxe/networkcovertchannels

Some network covert channel projects of my own research, containing a protocol channel tool (protocol switching covert channel, PCT/PSCC), a protocol hopping covert channel (PHCC) tool, the protocol channel-aware active warden (PCAW) and ... VSTT.

active covert-channel information-hiding information-security infosec network-analysis network-forensics network-science network-security network-steganography network-traffic-generator protocol-channels protocol-hopping protocol-hopping-covert-channels protocol-switching-covert-channels scientific-software secret-sharing steganography stego warden

Last synced: 06 Oct 2025

https://github.com/ocramz/algebraic-graphs-io

I/O utilities and datasets for algebraic-graphs

algebraic-graphs datasets graph-data graph-dataset graph-datasets graphs network-dataset network-science networks

Last synced: 14 Apr 2025

https://github.com/menicgiulia/NetMedPy

data-science information-extraction network-medicine network-science null-models systems-biology systems-pharmacology

Last synced: 12 Aug 2025

https://github.com/anespinosa/netmem

'netmem: Network Measures using Matrices' is an R Package

matrices multilayer-networks network-analysis network-science r r-package rstats sna social-network social-network-analysis sociology

Last synced: 17 Jan 2026

https://github.com/mmdanziger/recovery-coupling

Code and data for "Recovery Coupling in Multilayer Networks" ( https://doi.org/10.1038/s41467-022-28379-5)

network-science power-grid research resilience

Last synced: 13 Apr 2025

https://github.com/gesiscss/methods_seminar_2020_network_science

Introduction to Social Network Science in Python

2020 exercises network-analysis network-science python seminar

Last synced: 06 Mar 2026

https://github.com/damascenorafael/identify-bots-reddit-comment-network

Characterization and classification of bots using only structural characteristics of the network. Python development of network construction, component analysis and Neural Network for classification.

bot-detection complex-networks machine-learning network-analysis network-science networkx reddit reddit-bot

Last synced: 13 Apr 2025

https://github.com/lmiconsulting/cosasi

COntagion Simulation And Source Identification: a Python package for graph diffusion source inference

cyber disease-simulation epidemics graph-algorithms graph-theory message-passing network-analysis network-science python

Last synced: 01 May 2025

https://github.com/umitkaanusta/fraudringdetection-trustnetworks-trying-new-approach

Detecting fraud rings in a p2p trust network with high AUC score (better than 9 of 10 well-known algorithms)* using basic and intuitive trust metrics

data-science fraud fraud-detection graph graph-theory machine-learning network network-science social-network-analysis

Last synced: 27 Mar 2025

https://github.com/yilinjuang/github-repo-recommender

Github Repo Recommender System. 2017 Network Science Final Project.

github network-science recommendation-system recommender-system repository

Last synced: 15 Apr 2026

https://github.com/iglesias/netpred

Structured learning with SVMs in C++ and Python

hidden-markov-model machine-learning network-science probabilistic-graphical-models support-vector-machines

Last synced: 05 Jan 2026

https://github.com/jcrozum/biobalm

The biologist's Boolean attractor landscape mapper, building Waddington landscapes from Boolean networks.

answer-set-programming attractors biology boolean-networks control-theory discrete-dynamics feedback-vertex-set network-science petri-nets systems-biology waddington-landscape

Last synced: 22 Sep 2025

https://github.com/atomashevic/belief-influence

Repository for "Measuring the influence of beliefs in belief networks

arxiv attitude-network belief-networks ggm network-analysis network-science r

Last synced: 20 Jul 2025

https://github.com/velicast/dress-graph

DRESS: A Continuous Framework for Structural Graph Refinement

combinatorics community-detection data-structures-and-algorithms discrete-mathematics gnn-model graph-algorithms graph-classification graph-edge-coloring graph-edit-distance graph-embeddings graph-isomorphism graph-matching graph-neural-networks graph-retrieval graph-similarity-algorithms graph-theory machine-learning network-science weisfeiler-lehman

Last synced: 02 Apr 2026

https://github.com/neurodata/bgm

Repository for the paper "Bisected graph matching improves automated pairing of bilaterally homologous neurons from connectomes" https://direct.mit.edu/netn/article/doi/10.1162/netn_a_00287/113527/Bisected-graph-matching-improves-automated-pairing

connectomics graph-algorithms graph-analysis network-analysis network-science neuroscience python

Last synced: 14 Apr 2025

https://github.com/imsatyasaiteja/network_science

Research project that focuses on observing the Resilience of Delhi Road Networks to Traffic Disruptions

barabasi-albert betweenness-centrality degree-distribution hubs network-disruption-analysis network-science power-law random-networks robustness-analysis scale-free-networks standard-deviation

Last synced: 08 Oct 2025

https://github.com/albertjanvanhoek/evolution-by-emergence

LaTeX source of the open‑access book “Evolution by Emergence” on networks, complexity & universal evolution (CC‑BY).

alignment artificial-intelligence cc-by complexity-science emergence evolutionary-theory interdisciplinary-research latex network-science open-textbook systems-theory

Last synced: 19 Apr 2026

https://github.com/ricardolsmendes/sna-dw

Companion repository for my Data Science & Analytics MBA Term Paper: "Social Network Analysis applied to Data Warehouses: opportunities and constraints for Data Governance"

data-analytics data-governance data-science data-visualization network-science social-network-analysis

Last synced: 21 Apr 2026

https://github.com/mu373/tailestim

Estimate tail parameters of heavy-tailed distributions (including power law exponent gamma) in Python

conda-forge extreme-value-theory heavy-tailed-distributions network-science power-law powerlaw python scale-free scale-free-networks

Last synced: 02 Apr 2026

https://github.com/anty-filidor/bdma-experiments

Experimental repo for paper: https://doi.org/10.26599/BDMA.2024.9020010

influence-maximization multilayer-networks network-control network-science social-learning temporal-networks

Last synced: 22 Apr 2026

https://github.com/mt-digital/network-science-beamer-notes

Some slides I put together summarizing intro chapters from Barabási's Network Science book (http://networksciencebook.com/)

latex-beamer network-science

Last synced: 19 Jan 2026

https://github.com/mballarin97/drosophilanetwork

Analysis from the point of view of network science of the connectome of the drosophila

coarse-graining community-detection connectome drosophila-brains network-science robustness

Last synced: 12 Sep 2025

https://github.com/wakolivotes/network-science-facebook-social-networks

The project applies Network Science concepts to examine Facebook page-page graphs representing page names and mutual link connections across the pages for the specific Facebook id

network-science networkx pandas python

Last synced: 07 May 2026

https://github.com/erictleung/tidy-networks-cookbook

CRAN Task View for network science tools

network-science r task-view

Last synced: 03 Apr 2025

https://github.com/davidemiceli/basic-influence-roles

Detect and measure the Basic Influence Role each node plays in a Directed Network.

clustering complex-networks data-science graph-algorithms graph-theory network-analysis network-science social-network-analysis social-sciences

Last synced: 21 Mar 2025

https://github.com/phipsgabler/netsci-01

network-science sampling

Last synced: 18 Jun 2025

https://github.com/simonusher/pkp_network_science

A railway connections (Polskie Koleje Państwowe) network scraper with simple Folium visualizations. Created as part of network science course on WrUST.

graph network-science python scraping

Last synced: 12 Apr 2026

https://github.com/anty-filidor/network_diffusion_examples

Experimental repo for paper: 10.1109/DSAA54385.2022.10032425

covid-19 influence-maximization interacting-phenomena multilayer-networks network-science

Last synced: 22 Apr 2026

https://github.com/junipertcy/netscied-web

The public website for the Network Science Education in Taiwan initiative, built on Angular.

education netscied network-science taiwan

Last synced: 10 Mar 2026

https://github.com/murf-y/enhanced-networked-genetic-algorithm

A Scale-free Networked Genetic Algorithm with Balanced Exploration and Exploitation

evolutionary-algorithms genetic-algorithm network-science scale-free

Last synced: 09 Nov 2025

https://github.com/indiependente/master_thesis

My master thesis

glauber graphs ising-model ising-spin-models network-science thesis

Last synced: 03 Feb 2026

https://github.com/haaziq386/motifscale

MotifGraphLab is a Python framework for generating large graphs from 4‑node motifs. It computes scalable metrics (diameter, clustering, path length, triangles) with exact and approximate methods.

clustering-coefficient complex-networks data-science diameter-estimation graph-analysis graph-generation graph-theory motifs network-science networkx python research-tool scalability simulation