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Projects in Awesome Lists tagged with neuron

A curated list of projects in awesome lists tagged with neuron .

https://github.com/ArtemKirsanov/BlenderSpike

A Blender add-on to bring animations from NEURON

blender-addon neuron neuroscience

Last synced: 01 May 2025

https://github.com/swharden/pyabf

pyABF is a Python package for reading electrophysiology data from Axon Binary Format (ABF) files

abf electrophysiology hacktoberfest hacktoberfest2022 neuron neuroscience physiology

Last synced: 07 Apr 2025

https://github.com/srid/neuron-template

A template to get started with neuron

markdown neuron static-site zettelkasten

Last synced: 14 Oct 2025

https://github.com/RivuletStudio/rivuletpy

Robust 3D Neuron Tracing / General 3D tree structure extraction in Python for 3D images powered by the Rivulet2 algorithm. Pain-free Install & use in 5 mins.

airways arteries centerline curvilinear-coordinates image-processing medical-image-processing medical-imaging morphology neuroinformatics neuron python rivulet2-algorithm tracing

Last synced: 07 May 2025

https://github.com/bluebrain/bioexplorer

The Blue Brain BioExplorer (BBBE) is a tool for data visualization experts and scientists to extract and analyze scientific data from visualization and interactive exploration

astrocyte brain coronavirus covid19 dti glucose-levels immune-system molecular-biology neuroimaging neuron neurosimulation python raytracing rendering-engine sars-cov-2 science vasculature viral-infection virology virus

Last synced: 05 Apr 2025

https://github.com/natverse/nat

NeuroAnatomy Toolbox: An R package for the (3D) visualisation and analysis of biological image data, especially tracings of single neurons.

3d connectomics cran image-analysis neuroanatomy neuroanatomy-toolbox neuron neuron-morphology neuroscience r visualisation

Last synced: 22 Oct 2025

https://github.com/contextlab/computational-neuroscience

Short undergraduate course taught at University of Pennsylvania on computational and theoretical neuroscience. Provides an introduction to programming in MATLAB, single-neuron models, ion channel models, basic neural networks, and neural decoding.

computational-neuroscience course-materials data-analysis matlab modeling neuron problem-set simulation

Last synced: 07 Oct 2025

https://github.com/ContextLab/computational-neuroscience

Short undergraduate course taught at University of Pennsylvania on computational and theoretical neuroscience. Provides an introduction to programming in MATLAB, single-neuron models, ion channel models, basic neural networks, and neural decoding.

computational-neuroscience course-materials data-analysis matlab modeling neuron problem-set simulation

Last synced: 19 Jul 2025

https://github.com/bluebrain/morphio

A python and C++ library for reading and writing neuronal morphologies

glia mitochondria morphology neuron neurons python reticulum

Last synced: 01 Mar 2025

https://github.com/pyrho/nerveux.nvim

A neovim plugin written in lua to interact with the neuron Zettelkasten software.

neovim neuron nvim zettelkasten

Last synced: 01 May 2025

https://github.com/bluebrain/ultraliser

Reconstruction of watertight meshes and annotated volumes of neuroscience spatial structures from non-watertight inputs, segmented masks, skeletons of NGV morphologies and volumes.

astrocyte mesh morphology neuron neurons vasculature volume

Last synced: 14 May 2025

https://github.com/aca/neuron-language-server

Language server implementation for neuron

language-server-protocol neuron vim

Last synced: 01 May 2025

https://github.com/bluebrain/bluecellulab

Biologically detailed neural network simulations and analysis API

api biology brain cell circuit connection emodel network neural-network neuron neuroscience python simulation

Last synced: 14 May 2025

https://github.com/neuronsimulator/ringtest

Ring network model test to demonstrate the use of CoreNEURON

coreneuron hpc neuron neuroscience

Last synced: 11 Oct 2025

https://github.com/okerew/neural-web

This repository shows an alternative neural network structure to modern ones, inspiring from the brain and it's creativity, workings.

alternative architecture biology c cpu cuda gpu innovative kernel machine-learning markdown metal neural neural-network neuron objc shader structure

Last synced: 27 Jul 2025

https://github.com/zer0int/clip-vit-visualization

What do CLIP Vision Transformers learn? Feature Visualization can show you!

activation clip feature neuron vision-transformer visualization vit xai

Last synced: 09 Jul 2025

https://github.com/neuroml/org.neuroml.export

Export from NeuroML & LEMS

brian lems neuroml neuron pynn sbml

Last synced: 28 Apr 2025

https://github.com/dnnsmnstrr/zettelkasten

My public notes on things I learned, personal thoughts and ideas 🗃️

dendron digital-garden knowledge-base neuron notes second-brain zettelkasten

Last synced: 14 Apr 2025

https://github.com/neuronlabs/errors

Simple golang error handling with classification primitives.

classification errors golang golang-error interfaces neuron

Last synced: 14 Mar 2025

https://github.com/iraikov/neuroh5

An HDF5-based library for parallel I/O operations on data structures for large-scale neural networks

distributed-computing hdf5 mpi mpi-applications mpi-io neuron neuronal-network parallel-io

Last synced: 28 Jul 2025

https://github.com/bluebrain/emodel-generalisation

Generalisation of electrical models of neurons with MCMC

electrophysiology generalisation mcmc neuron

Last synced: 14 May 2025

https://github.com/mjahmadee/mcculloch-pitts

McCulloch-Pitts Neuron

mcculloch-pitts neuron

Last synced: 28 Feb 2025

https://github.com/fabiosmuu/artificial.js

This is an ongoing project intended to make it easier to use neural network creation, genetic algorithms, and other data science and machine learning skills.

ai algorithm artificial bias genetic genetic-algorithm ia inteligence inteligencia learning neural neural-network neuron normalize pooling rede-neural relu rna sigmoid weight

Last synced: 03 Mar 2025

https://github.com/mrkrd/cochlear_nucleus

Computational models of the globular bushy cells in the ventral cochlear nucleus

brian cochlear-nuclues computational-neuroscience endbulb-of-held globular-bushy-cells model neuron plasticity python synapse synaptic-depression

Last synced: 24 Dec 2025

https://github.com/imvetri/artificial-intelligence

Insincere System design about building intelligence, based on neural fluid model. Still a draft and I'm gathering resources and design ideas. Modern AI is a fancy calculator. It cannot be a creator/creation. It cannot be a simulacra/simulation.

fluid microfluidics neuron system visualcomputing

Last synced: 14 Sep 2025

https://github.com/rugleb/neuron

Simple model of artificial Neuron

cpp education neural-network neuron

Last synced: 10 Apr 2025

https://github.com/bluebrain/bluenaas-singlecell

BlueNaaS Single Cell

emodel experiment neuron

Last synced: 14 May 2025

https://github.com/mrkrd/spiral_ganglion

Auditory nerve fiber models for synaptic and electrical stimulation

anf auditory auditory-nerve auditory-nerve-fiber computational-neuroscience hearing model neuron spiral-ganglion

Last synced: 30 Oct 2025

https://github.com/dvorka/mindforger-neural-network

C++ simple neural network library ~ rewrite of ANSI C Genann https://codeplea.com/genann to C++ w/ minor improvements.

ai backpropagation dropout machine-learning neural-network neuron regularization

Last synced: 09 Mar 2025

https://github.com/12danielll/neural_networks_project

The project focuses on analyzing neural activity data to classify neuron types (spiny and aspiny). It integrates unsupervised learning methods (PCA, Autoencoders) and supervised learning models (Logistic Regression, MLP) to build accurate classifiers that effectively analyze neurons' electrical responses.

2d-and-3d-visualizations autoencoders classifier-evaluation cortical-neurons data-compression gradient-descent high-dimensional-neural-datasets logistic-regression mlp mlp-networks neural-classification neuron neuronal-network pca-analysis perceptron roc-auc stochastic-gradient-descent supervised-learning unsupervised-learning

Last synced: 16 Mar 2025

https://github.com/generic-matrix/neuron

This is a neuron made using PHP -Reinforcement learning, weights and accuracy visualization

neuron php

Last synced: 27 Feb 2025

https://github.com/jvaverka/zettelkasten

Zettelkasten managed with zk and generated with emanote

neuron zettelkasten zk

Last synced: 24 Mar 2025

https://github.com/john5934/neuron_asm

Weighted sum of a neuron in a neural net

arm64 assembly-language neural-network neuron weighted-sum x86-64

Last synced: 22 Jun 2025

https://github.com/sourceduty/deep_vision_neuron

An innovative neuron model designed specifically for handling intricate image classification tasks involving nested submodules and multi-level hierarchies.

ai-imaging artificial-intelligence biomedical chatgpt computer-science custom-gpt deep-vision dvn gpt gpts imaging neural-network neural-networks neuron neuron-model openai science theoretical-computer-science

Last synced: 19 Jun 2025

https://github.com/devbluecomet/neuron_aio

The repositories are organized using the monorepo model to keep the code on different ends centralized and unaffected, while making it as reusable as possible during the packaging and compilation process.

css electon eslint html husky javascript neuron

Last synced: 25 Mar 2025

https://github.com/janeliascicomp/colormipsearch

Distributed Color Depth MIP Search

neuron neuroscience search-algorithm

Last synced: 21 Feb 2025

https://github.com/sourceduty/linear_equation_neuron

An innovative neuron framework designed to solve systems of linear equations using Gaussian elimination with back substitution.

ai artificial-intelligence artificial-neural-networks artificial-neuron chatgpt custom-gpt gpt gpts neurology neuron neuron-model neuron-models neuroscience openai

Last synced: 19 Jun 2025

https://github.com/guilt/neuron-kernel-generator

A modular C++ tool for generating HLO and NEFF files from GGML/llama.cpp kernels for AWS Neuron (Inferentia/Trainium).

aws ggml kernel neuron

Last synced: 09 Oct 2025

https://github.com/brunos3d/perceptron-even-odd-classifier

Interactive visualization of a perceptron neural network that classifies numbers as even or odd using JavaScript and D3.js.

ai bias even example input math neural-network neuron odd output perceptron sample study train

Last synced: 10 Oct 2025

https://github.com/tristan0x/jupyterlab-neuron

Docker container to work with Neuron in Jupyter notebooks

docker jupyter-notebook neuron

Last synced: 30 Dec 2025

https://github.com/jaffar-hussein/neurone-models

These are models that are used to study the spiking of the neurones organized according to their complexity from just considering the voltage to doing the ADEX model

brian brian2 matplotlib neuron neuron-model neuron-simulations neuroscience pyhon3

Last synced: 17 Mar 2025

https://github.com/yogavardha/linear_equation_neuron

A Linear Equation Neuron (LEN) efficiently solves systems of linear equations using Gaussian elimination and back substitution. This precise computational unit integrates seamlessly into AI systems, enhancing their interpretability and reliability. 🐙💻

ai artificial-neural-networks artificial-neuron chatgpt custom-gpt gpt gpts neurology neuron neuron-model neuron-models neuroscience openai

Last synced: 26 Jun 2025

https://github.com/csinva/biophysical-threshold-simulations

Simulations for characterizing stochastic threshold in biophysical neurons.

biophysical neuron simulation stochastic threshold

Last synced: 02 Apr 2025

https://github.com/nokskiy/neuron-data-converter

Weight-based data converter

csharp dotnet neuron weights

Last synced: 25 Jun 2025

https://github.com/maktoobgar/neural_network

A project which can be used to visually train a neural network.

gdscript godot godot4 neural-network neuron

Last synced: 25 Feb 2025

https://github.com/bergio13/hh-model

Hodgkin–Huxley model implementation in julia

action-potential julia neuron neuroscience simulation

Last synced: 25 Dec 2025

https://github.com/jcbritobr/introneuron

Introdução ao modelo de redes neurais

julia-language machine-learning neural-network neuron pluto-notebooks

Last synced: 30 Jul 2025

https://github.com/b0o/zettelkasten-public

Maddison's public Zettelkasten

neuron notebook zettelkasten

Last synced: 01 Aug 2025

https://github.com/jkeresman01/jneuralnetwork

Simple neural network in C++

ai cpp neural-network neuron

Last synced: 14 Sep 2025

https://github.com/sourceduty/polar_neuron

A new neural model made of competing polar subneuron modules within a single neuron using opposing activation patterns.

ai artificial-intelligence artificial-neural-networks artificial-neuron chatgpt computer-science custom-gpt framework gpt gpts neural neural-framework neural-network neuron polar-neuron science

Last synced: 08 Aug 2025

https://github.com/mrinalxdev/go-learn

A brain like memory management system in python

brain memory memory-management neuron python

Last synced: 03 Sep 2025

https://github.com/shaoruu/char-recog

Character recognition built with simple P5JS and plain JavaScript

ai character digit huang ian javascript network neuron p5js recognition shaoruu

Last synced: 22 Mar 2025

https://github.com/iver-wharf/wharf-notes

Architectural notes. No hard decisions, but instead notes from research and exploration

neuron wharf

Last synced: 06 Mar 2025

https://github.com/mr-ravin/aptxneuron

A PyTorch implementation of the APTx Neuron architecture, featuring experiments and results on the MNIST handwritten digit dataset.

aptx-neuron artificial-intelligence deep-learning deep-neural-networks neural-network neuron python python3 pytorch-implementation

Last synced: 20 Jul 2025

https://github.com/rubnsbarbosa/perceptron

The Simple Perceptron is the simplest Artificial Neural Network Algorithm with a single neuron.

neural-network neuron perceptron

Last synced: 23 Mar 2025

https://github.com/silmathoron/elif-madexp

Energy-based neuronal models (eLIF and mAdExp)

brian energy modeling nest neuron neuroscience simulators

Last synced: 03 Mar 2025

https://github.com/mohazamani/intra-layer-neuronal-mechanisms

Explores intra-layer neuronal mechanisms in spiking neural networks, implementing Lateral Inhibition, KWTA, and Homeostasis to enhance learning and pattern recognition.

computational-neur homeostasis k-winner-take-all lateral-inhibition neural-networks neuron neuroscience spiking-neural-networks stdp-learning

Last synced: 27 Feb 2025