https://github.com/recursionpharma/maes_microscopy

Official repo for Recursion's accepted spotlight paper at NeurIPS 2023 Generative AI & Biology workshop.

biology computer-vision deep-learning generative-ai masked-autoencoder microscopy phenomics

Last synced: 06 Feb 2026

https://github.com/monarch-initiative/phenol

phenol: Phenotype ontology library

genomics human-phenotype-ontology java mammalian-phenotype-ontology monarchinitiative ontologies phenomics phenotypes

Last synced: 29 Oct 2025

https://github.com/drseb/hpo-translations

Internationalisation of the HPO content

hpo hpo-translations language obofoundry ontology phenomics phenotype-ontologies phenotypes phenotyping semantic-web translation

Last synced: 21 Jan 2026

https://github.com/Computational-Plant-Science/plantit

hpc phenomics phenotyping science-gateways singularity

Last synced: 08 May 2025

https://github.com/terraref/reference-data

Coordination of Data Products and Standards for TERRA reference data

agriculture phenomics sensor-data

Last synced: 16 Jan 2026

https://github.com/drseb/hpo-archive

HPO archive of the ontology and annotations

annotations archive hpo hpo-archive ontology phenomics phenotype-ontologies phenotypes phenotyping

Last synced: 08 Feb 2026

https://github.com/drseb/phenopposites

Project to generate phenotype opposite_of relationships and investigate the effect on ontology-based algorithms

ontologies ontology phenomics phenotype phenotype-ontologies phenotypes phenotyping semantic-web semantics similarity-measures

Last synced: 21 Jan 2026

https://github.com/asad-ismail/smn

Scaleable multitask Network

deep-learning image-processing instance-segmentation keypoint-detection multitask-learning phenomics phenotyping pytorch vegetable

Last synced: 29 Apr 2026

https://github.com/drseb/hpoweb

HPO web browser created with Vaadin

browser hpo ontologies ontology phenomics phenotype-ontologies phenotypes phenotyping website

Last synced: 09 Apr 2025

https://github.com/neurogenomics/phenomix

Explore the phenome ✨🎆✨

decomposition-algorithm dimensionality-reduction genomics gwas phenomics

Last synced: 09 Oct 2025

https://github.com/drseb/hpo-owl-qc

The QC software for the OWL version of HPO (only text-checks, not so much logic included)

hpo obofoundry ontology phenomics phenotype phenotype-ontologies phenotypes quality-control

Last synced: 09 Apr 2025

https://github.com/drseb/hpo-obo-qc

The QC software for the OBO version of HPO

hpo obofoundry ontology phenomics phenotype phenotype-ontologies phenotypes phenotyping quality-control

Last synced: 09 Apr 2025