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Projects in Awesome Lists tagged with population-genetics

A curated list of projects in awesome lists tagged with population-genetics .

https://github.com/lh3/psmc

Implementation of the Pairwise Sequentially Markovian Coalescent (PSMC) model

bioinformatics genomics population-genetics

Last synced: 03 Aug 2024

https://github.com/grunwaldlab/poppr

🌶 An R package for genetic analysis of populations with mixed (clonal/sexual) reproduction

clonality genetic-analysis genetic-distances minimum-spanning-networks multilocus-genotypes multilocus-lineages population-genetics populations r

Last synced: 01 Aug 2024

https://github.com/thibaultlatrille/adaptapop

Genes and sites under adaptation at the phylogenetic scale also exhibit adaptation at the population-genetic scale

phylogenetics polymorphic-variants population-genetics scientific-publication

Last synced: 02 Oct 2024

https://github.com/thibaultlatrille/nucleotidebias

An improved codon modeling approach for accurate estimation of the mutation bias

codon-models population-genetics python scientific-publications

Last synced: 02 Oct 2024

https://github.com/thibaultlatrille/genotypephenotypefitness

Quantifying the impact of changes in effective population size and expression level on the rate of coding sequence evolution

codon-models population-genetics scientific-publications

Last synced: 02 Oct 2024

https://github.com/m-osky/population_genetics

Various unix and perl scripts to deal with genetics data: prepare submission files, extract results, and so. Check their "help" to see usage

bash-script genomics perl-script population-genetics population-genomics shell-script

Last synced: 28 Sep 2024

https://github.com/armanbilge/coalescentsaver

A Mac screensaver derived from @trvrb's coaltrace

phylogenetics population-genetics screensaver

Last synced: 01 Oct 2024