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Projects in Awesome Lists tagged with population-genetics
A curated list of projects in awesome lists tagged with population-genetics .
https://github.com/lh3/psmc
Implementation of the Pairwise Sequentially Markovian Coalescent (PSMC) model
bioinformatics genomics population-genetics
Last synced: 03 Aug 2024
https://github.com/grunwaldlab/poppr
🌶 An R package for genetic analysis of populations with mixed (clonal/sexual) reproduction
clonality genetic-analysis genetic-distances minimum-spanning-networks multilocus-genotypes multilocus-lineages population-genetics populations r
Last synced: 01 Aug 2024
https://github.com/thibaultlatrille/adaptapop
Genes and sites under adaptation at the phylogenetic scale also exhibit adaptation at the population-genetic scale
phylogenetics polymorphic-variants population-genetics scientific-publication
Last synced: 02 Oct 2024
https://github.com/thibaultlatrille/nucleotidebias
An improved codon modeling approach for accurate estimation of the mutation bias
codon-models population-genetics python scientific-publications
Last synced: 02 Oct 2024
https://github.com/thibaultlatrille/genotypephenotypefitness
Quantifying the impact of changes in effective population size and expression level on the rate of coding sequence evolution
codon-models population-genetics scientific-publications
Last synced: 02 Oct 2024
https://github.com/m-osky/population_genetics
Various unix and perl scripts to deal with genetics data: prepare submission files, extract results, and so. Check their "help" to see usage
bash-script genomics perl-script population-genetics population-genomics shell-script
Last synced: 28 Sep 2024
https://github.com/armanbilge/coalescentsaver
A Mac screensaver derived from @trvrb's coaltrace
phylogenetics population-genetics screensaver
Last synced: 01 Oct 2024
https://github.com/armanbilge/apg
ancient population genomics
ancient-dna-sequences bayesian-inference coalescent mcmc population-genetics population-genomics
Last synced: 01 Oct 2024