Ecosyste.ms: Awesome
An open API service indexing awesome lists of open source software.
https://github.com/aqlaboratory/proteinnet
Standardized data set for machine learning of protein structure
dataset deep-learning machine-learning protein-sequence protein-structure proteins
Last synced: 11 Jul 2024
https://github.com/wudangt/awesome-molecular-modeling-and-drug-discovery
A curated list of awesome Molecular Modeling And Drug Discovery 🔥
alphafold alphafold2 bioinformatics drug-discovery molecular-docking molecular-evolution molecular-generation molecular-modeling protein-engineering protein-sequence protein-structure structural-biology
Last synced: 26 Jun 2024
https://github.com/johnnytam100/awesome-protein-design
A curated list of awesome protein design research, software and resources.
alphafold alphafold-multimer alphafold2 bioinformatics bioinformatics-tool molecular-biology protein-design protein-engineering protein-folding protein-function protein-protein-interaction protein-sequence protein-structure protein-structure-prediction structural-bioinformatics structural-biology
Last synced: 18 Jun 2024
https://github.com/ostrokach/proteinsolver
Graph neural network for generating novel amino acid sequences that fold into proteins with predetermined topologies.
bioinformatics graph-neural-networks protein protein-design protein-sequence protein-structure structural-biology
Last synced: 18 Jun 2024
https://github.com/westlake-repl/SaProt
Saprot: Protein Language Model with Structural Alphabet
alphafold2 foldseek predicted-structures pretraining protein protein-language-model protein-llm protein-sequence protein-structure representation-learning structural-alphbet structure-aware
Last synced: 12 May 2024
https://github.com/tbepler/protein-sequence-embedding-iclr2019
Source code for "Learning protein sequence embeddings using information from structure" - ICLR 2019
deep-learning language-model protein-embedding protein-modeling protein-representation-learning protein-sequence protein-structure pytorch recurrent-neural-networks
Last synced: 22 Mar 2024
