Projects in Awesome Lists tagged with proteogenomics
A curated list of projects in awesome lists tagged with proteogenomics .
https://github.com/bzhanglab/neoflow
NeoFlow: a proteogenomics pipeline for neoantigen discovery
neoantigen-discovery neoantigen-prediction nextflow-pipeline novel-peptide-identifications proteogenomics
Last synced: 07 Feb 2026
https://github.com/bigbio/py-pgatk
Python tools for proteogenomics analysis toolkit
ensembl mass-spectrometry proteogenomics proteogenomics-analysis-toolkit proteomics python vcf
Last synced: 17 Jan 2026
https://github.com/linas/biome-distribution
Research into statistical distributions of genomes, proteomes and reactomes
genomic-data-analysis genomics-visualization proteogenomics proteomics reactome reactome-pathway
Last synced: 03 Jan 2026
https://github.com/bigbio/quantms-utils
A python library with scripts and helpers classes for quantms workflow
bigdata cloud mass-spectrometry nextflow proteogenomics proteomics
Last synced: 08 Apr 2026
https://github.com/astrabert/saccharomyces-pythia
Saccharomyces cerevisiae information, gene calling and ORF identification assistant
ai chatbot-application gene-calling generative-ai genomics gradio machine-learning model-organisms pilot-project proteogenomics research-assistant saccharomyces-cerevisiae sequence-classification
Last synced: 05 Mar 2025
https://github.com/bigbio/pgdb
ProteomeGenomics Database Creation - Nextflow Pipeline
cosmic ensembl mass-spectrometry nextflow nf-core proteogenomics proteomics
Last synced: 17 Jan 2026
https://github.com/bigbio/pgt-pangenome
Protegenomics analysis based on Pangenome references
mass-spectrometry non-canonical pangenome protein proteogenomics proteomics public-proteomics quantms variants
Last synced: 17 Jan 2026