Data

Tools

Indexes

Applications

Experiments

Awesome

An open API service indexing awesome lists of open source software.

Projects in Awesome Lists tagged with research-software

A curated list of projects in awesome lists tagged with research-software .

https://github.com/imsy-dkfz/simpa

The Simulation and Image Processing for Photonics and Acoustics (SIMPA) toolkit.

acoustics image-processing photoacoustic-imaging photonics research-software simulation

Last synced: 04 Apr 2025

https://github.com/fair-software/howfairis

Command line tool to analyze a GitHub or GitLab repository's compliance with the fair-software.eu recommendations

fair fair-software fair4rs fairness research-software

Last synced: 02 Apr 2026

https://github.com/fair-software/howfairis-github-action

GitHub Action to analyze a GitHub repository’s compliance with the fair-software.eu recommendations.

fair-software fair4rs research-software

Last synced: 04 Apr 2026

https://github.com/richardlitt/quick-tips-for-making-your-software-outlive-your-job

The paper repository for "10 quick tips for making your software outlive your job"

academia academic-research best-practices latex plos research-software science software

Last synced: 31 Jul 2025

https://github.com/chanzuckerberg/software-impact-hackathon-2023

A collection of projects by participants in CZI's hackathon "Mapping the Impact of Research Software in Science" (October 2023)

hackathon research-software scientific-computing scientific-publications software-citation software-mention

Last synced: 05 Mar 2026

https://github.com/au-research/visible-research-software

The Visible Research Software Interest Group is a space for community conversation, i.e. an online forum for people within Australasian Research Institutions to discuss visibility of research software, e.g. citation, publication, and FAIRification. https://sites.google.com/ardc.edu.au/visible-research-software

citation community fair research-software

Last synced: 19 Jan 2026

https://github.com/rseng/rse

tools for assessment and categorization of research software

research-software research-software-encyclopedia rseng

Last synced: 21 Feb 2026

https://github.com/rseng/software

research software encyclopedia database

criteria hacktoberfest research-software rseng software taxonomy

Last synced: 21 Feb 2026

https://github.com/caltechlibrary/iga

IGA is the InvenioRDM GitHub Archiver, a standalone program as well as a GitHub Action that lets you automatically archive GitHub software releases in an InvenioRDM repository.

archives archiving automation code-preservation github-action github-actions github-automation invenio invenio-rdm preservation reproducibility reproducible-research research-data-management research-software software-archiving software-preservation source-code-archiving

Last synced: 24 Jun 2025

https://github.com/softwarepub/project.software-metadata.pub

The HERMES project repository, mostly used to capture meta elements at project level and do project management.

deposition deposition-metadata helmholtz hermes metadata project research-software software-publication

Last synced: 17 Jan 2026

https://github.com/utrechtuniversity/swords-uu

Implementation of the SWORDS framework for Utrecht University.

fair open-science research-software swords utrecht-university

Last synced: 14 Jul 2025

https://github.com/carpentries-incubator/fair-research-software

A course on tools and practices for open, sustainable and FAIR (Findable, Accessible, Interoperable and Reusable) research software

carpentries-incubator english fair fair-software lesson pre-alpha research-software

Last synced: 02 Sep 2025

https://github.com/code4ref/code4ref.github.io

How to record research software in CRIS (Continuing Research Information Systems)

collabw19 research-reproducibility research-software ssi

Last synced: 13 Jul 2025

https://github.com/utrechtuniversity/swords-template

Template to implement the SWORDS framework for your organisation

github gitlab research research-software software template utrecht-university

Last synced: 14 Jul 2025

https://github.com/mi2e-k/rabet

Cross-platform desktop app for real-time animal behavior video annotation, analysis, and reliability assessment.

animal-behavior animal-research behavior-annotation behavioral-analysis behavioural-annotation desktop-application ethology neuroscience research-software video-annotation

Last synced: 28 May 2026

https://github.com/kedhareswer/thesisflow-ai

Accelerate your research with intelligent tools for discovery, analysis, collaboration, and project management.

ai collaboration editor gemini-ai literature-review literature-search openai rag research-and-development research-project research-software research-tool supabase webapp

Last synced: 29 Aug 2025

https://github.com/karthik/urssi_figures

Repository accompanying "A Survey of the State of the Practice for Research Software in the United States"

research-software rse survey

Last synced: 03 Feb 2026

https://github.com/haddocking/cport

CPORT is a Consensus Prediction Of interface Residues in Transient complexes used to predict protein-protein interface residues.

bioinformatics computational-biology deep-learning deep-neural-networks machine-learning meta-predictor predictor protein-protein-interaction research-software utrecht-university

Last synced: 21 Jan 2026

https://github.com/henriktrom/multi-camera-calib

Package for calibrating synchronized multi-camera setups, designed for robotic platforms. It captures calibration data, runs ChArUco-based calibration, and validates the results with 3D backprojection.

camera-calibration multi-camera-calibration open-source research-software

Last synced: 24 May 2026

https://github.com/henriktrom/pose_inference

A high-performance, multi-threaded C++ pipeline for real-time multi-camera keypoint detection.

cpp keypoint-detection multi-threading open-source real-time research-software rtmpose

Last synced: 24 May 2026

https://github.com/ptgm/pyfunctionhood

Local computation of immediate neighbours of a given monotone non-degenerate Boolean function

boolean-function computer-science research-software

Last synced: 14 Jan 2026

https://github.com/inab/fairsoft_indicators

Specification of FAIRsoft indicators, by OpenEBench.

fair fairness-indicators research-software

Last synced: 19 Mar 2026

https://github.com/christiemj/clock-drift-simulation

A Monte Carlo simulation in Python to model vacuum-induced frequency drifts in atomic clocks, with code and visuals (experimental setup, simulated vs. real-world comparison, and drift graph), as described in "Probing Vacuum-Induced Clock Drifts via Quantum Metrology: A Testable Hypothesis" (DOI: 10.5281/zenodo.15163879). Licensed under GPL 3.0.

allan-variance atomic-clocks cesium-ion clock-drift matplotlib monte-carlo-simulation numpy open-science pandas physics precision-metrology python quantum-metrology research-software scipy simulation vacuum-fluctuations vacuum-noise

Last synced: 17 Apr 2026

https://github.com/iowarp/clio-coder

Agentic coding harness for supervised repository work, model-target orchestration, worker dispatch, and self-development.

agentic-ai agentic-coding ai coding-agents developer-tools llm multi-agent research-software software-engineering terminal

Last synced: 30 Apr 2026

https://github.com/rvhonorato/jobd

A lightweight Golang REST API daemon for seamless file transfer and job management in containerized research software environments.

containerization docker golang microservices research-software rest-api

Last synced: 17 May 2026

https://github.com/kadubon/ai-real-economy-bottleneck-simulator

Interactive browser simulator for exploring how AI capability growth becomes real-economy output, or fails under physical and institutional bottlenecks.

ai-economics bottleneck-analysis economic-growth economics-models institutional-economics open-source physical-infrastructure policy-simulation python research-software risk-analysis simulation streamlit

Last synced: 30 May 2026

https://github.com/ylecoyote/reproducible-manuscript-template

Scientific manuscript verification framework ensuring reproducibility through contract-driven testing

computational-science manuscript-verification python reproducible-research research-software scientific-computing scientific-workflow testing

Last synced: 04 Mar 2026