Projects in Awesome Lists tagged with scrna-seq-data
A curated list of projects in awesome lists tagged with scrna-seq-data .
https://github.com/aipoch/medical-research-skills
Hundreds of agent skills for medical research, including protocol design, data analysis, evidence insights, and academic writing.
academic-writing agent-skills ai bioinformatics biology cancer-genomics clinical-research computational-biology data-analysis data-visualization differential-expression genomics medical medical-research protocol-design rna-seq-data science scrna-seq-data single-cell spatial-transcriptomics
Last synced: 23 Jul 2026
https://github.com/nsalomonis/altanalyze
AltAnalyze is a multi-functional and easy-to-use software package for automated single-cell and bulk gene and splicing analyses. Easy-to-use precompiled graphical user-interface versions available from our website.
alternative-splicing bam-files bioinformatics-pipeline cell-cycle cell-type-classification clustering command-line-tool fastq-anaysis graphical-interface louvain-community-detection marker-gene-analysis network-analysis pagerank pathway-analysis python rna-seq-data scrna-seq-data single-cell-splicing splicing-quantification splicing-visualization
Last synced: 09 Apr 2026
https://github.com/vandijklab/cell2sentence-ft
Cell2Sentence turns scRNA-seq data into text for LLM training.
bioinformatics scrna-seq scrna-seq-data single-cell
Last synced: 16 Jan 2026
https://github.com/alleninstitute/tasic2016data
Single cell transcriptomic data from Tasic, et al. (2016)
scrattch scrna-seq-data transcriptomics
Last synced: 11 Apr 2025
https://github.com/multitalk/miRTalk
Extracellular vesicle-derived miRNA-mediated cell-cell communication inference for single-cell transcriptomic data
cell-cell-communication cell-cell-interaction exosomes extracellular-vesicles microvesicles mirna scrna-seq-data single-cell-rna-seq
Last synced: 17 Apr 2025
https://github.com/rongtingting/cnv_calling_benchmark
Benchmarking records for scRNA-seq CNV detection.
benchmarking cnv-detection scrna-seq-data
Last synced: 24 May 2026
