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Projects in Awesome Lists tagged with sequence-annotation

A curated list of projects in awesome lists tagged with sequence-annotation .

https://github.com/howl-anderson/seq2annotation

基于 TensorFlow & PaddlePaddle 的通用序列标注算法库(目前包含 BiLSTM+CRF, Stacked-BiLSTM+CRF 和 IDCNN+CRF,更多算法正在持续添加中)实现中文分词(Tokenizer / segmentation)、词性标注(Part Of Speech, POS)和命名实体识别(Named Entity Recognition, NER)等序列标注任务。

bilstm-crf bilstm-crf-model idcnn idcnn-crf named-entity-extraction named-entity-recognition part-of-speech part-of-speech-tagger sequence-annotation tensorflow tensorflow-models

Last synced: 02 May 2025

https://github.com/tseemann/mokka

Annotate your metagenome assemblies

metagenome-annotation metagenomics sequence-annotation

Last synced: 06 Feb 2026

https://github.com/cdcgov/clean-genes

A rust crate that automatically cleans up a gene alignment by trimming to ORF and identifying and/or removing problematic sequences.

bioinformatics cdc-influenza-division data-cleaning data-normalisation data-normalization data-science fasta ncird ncird-id sequence-alignment sequence-analysis sequence-annotation

Last synced: 01 Mar 2026