https://github.com/soedinglab/mmseqs2

MMseqs2: ultra fast and sensitive search and clustering suite

alignment bioinformatics blast linclust metagenomics mmseqs profile-search sequence-clustering sequence-search taxonomy

Last synced: 13 May 2025

https://github.com/soedinglab/MMseqs2

MMseqs2: ultra fast and sensitive search and clustering suite

alignment bioinformatics blast linclust metagenomics mmseqs profile-search sequence-clustering sequence-search taxonomy

Last synced: 05 May 2025

https://github.com/rcedgar/muscle

Multiple sequence and structure alignment with top benchmark scores scalable to thousands of sequences. Generates replicate alignments, enabling assessment of downstream analyses such as trees and predicted structures.

algorithms bioinformatics biology nucleotide-alignment protein-alignment protein-structure protein-structure-alignment sequence-clustering sequence-search

Last synced: 12 Apr 2025

https://github.com/soedinglab/mmseqs

alignment cpp mmseqs opensource sequence-clustering

Last synced: 27 Apr 2025

https://github.com/mrzresearcharena/protein-clustering

Protein Clustering

evolutionary-scale-modeling kmeans-clustering linclust mmseqs2 protein-clustering sequence-clustering unsupervised-learning

Last synced: 06 Mar 2025