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Projects in Awesome Lists tagged with short-read-mapper
A curated list of projects in awesome lists tagged with short-read-mapper .
https://github.com/Cibiv/NextGenMap
NextGenMap is a flexible highly sensitive short read mapping tool that handles much higher mismatch rates than comparable algorithms while still outperforming them in terms of runtime. This allows analysing large scale datasets even with increased SNP rates or higher error rates (e.g. caused by specialized experimental protocols) and avoids biases caused by highly variable regions in the genome.
c-plus-plus-11 next-generation-sequencing opencl short-read-mapper
Last synced: 09 Nov 2024
https://github.com/muellan/metacache
memory efficient, fast & precise taxnomomic classification system for metagenomic read mapping
bioinformatics bioinformatics-algorithms bioinformatics-tool classification dna-sequences fasta fastq genome genomic-data-analysis long-reads metagenomes metagenomic-analysis metagenomic-classification metagenomic-data metagenomics ncbi-refseq read-mapping refseq short-read-mapper taxonomy
Last synced: 19 Dec 2024
