Projects in Awesome Lists tagged with transcriptome-annotation

A curated list of projects in awesome lists tagged with transcriptome-annotation .

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https://github.com/ncbi/cloud-transcriptome-annotation

Time and cost comparison on GCP and AWS for transcriptome annotation

aws gcp jupyter-notebook transcriptome-annotation

Last synced: 07 Oct 2025

https://github.com/nlm-dir/cloud-transcriptome-annotation

Time and cost comparison on GCP and AWS for transcriptome annotation

aws gcp jupyter-notebook transcriptome-annotation

Last synced: 11 Mar 2026

https://github.com/gauravcodepro/sequence-annotation

A function to make the genome and the transcriptome annotations to reflect the gene regions and how they should be displayed. Provided a gff file and asked annotation and other columns it uses pygenomeviz to make all the annotation maps.

genome genome-analysis genome-annotation transcriptome-annotation

Last synced: 26 May 2026

https://github.com/ibchgenomic/trinity-analyzer

from trinity assembly to deep learning

genome-analysis genome-annotation transcriptome-annotation transcriptome-assembly trinity

Last synced: 18 Mar 2025

https://github.com/gauravcodepro/tair-gff-ids

A set of functions which will provide easy access and cleaned gff from tair and uses a dataframe and datascience approach to get the systematic tair ids and their coordinates from the tair 10 gff version. It can be applied to any version of the tair for getting the systematic retrival of the tair ids.

genome genome-analysis genome-annotation genome-assembly genome-sequencing tair tair3 transcriptome-annotation transcriptome-assembly