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Awesome

An open API service indexing awesome lists of open source software.

Projects in Awesome Lists by BioGenies

A curated list of projects in awesome lists by BioGenies .

https://github.com/biogenies/seminar

Last synced: 13 Mar 2025

https://github.com/biogenies/biolettabillas

Biosława Biospodarek, known by her stage name Bioletta Billas, was a Polish and international cabaret star, R package developer, actress, imposter and songwriter.

Last synced: 15 May 2025

https://github.com/biogenies/cancergram

Predicts anticancer peptides using random forests trained on the n-gram encoded peptides. The implemented algorithm can be accessed from both the command line and shiny-based GUI.

anticancer-peptides bioinformatics k-mer n-gram peptide-identification r-package random-forests

Last synced: 03 Mar 2026

https://github.com/biogenies/plastogram

Predicts subplastid localization of proteins along with sequence origin (plastid- or nuclear-encoded).

bioinformatics chloroplast hmm-profile hmmer plastid r-package random-forest subchloroplast-localization subplastid-localization

Last synced: 26 Apr 2026

https://github.com/biogenies/tidysqadv

advanced algorithms on biological sequences

Last synced: 13 Mar 2025

https://github.com/biogenies/tidypkg

tidypkg seamlessly supports good practices in the package development for R.

Last synced: 11 Apr 2026

https://github.com/biogenies/kmerfilters

Tools for filtering k-mer data

genomics k-mer n-gram peptide-identification proteomics

Last synced: 13 Mar 2025

https://github.com/biogenies/golem-modules-example

Example of golem app with simple modules from biogenies seminar

Last synced: 13 Mar 2025

https://github.com/biogenies/negativedatasets

Benchmarks in antimicrobial peptide prediction are biased due to the selection of negative data.

antimicrobial-peptides benchmarking machine-learning negative-sampling peptides r

Last synced: 21 Apr 2026