Ecosyste.ms: Awesome
An open API service indexing awesome lists of open source software.
Projects in Awesome Lists by Daylily-Informatics
A curated list of projects in awesome lists by Daylily-Informatics .
https://github.com/daylily-informatics/daylily
A NGS analysis framework for WGS data, which automates the entire process of spinning up AWS EC2 spot instances and processing FASTQ to snvVCF in <60m, for dollars a sample and achieving Fscores of 0.998.
aws bioinformatics bioinformatics-pipeline budgeting cwl ec2 ephemeral genomic-data-analysis giab human-genome informatics ngs parallel-cluster scalable scaling slurm snakemake snv-call wgs
Last synced: 15 Nov 2024
https://github.com/daylily-informatics/zebra_day
Zebra Label Printing library & API (for network connected printers). Manage 100s of printers and ZPL label templates in one place.
aws barcode barcode-generator bioinformatics direct-thermal direct-thermal-transfer discovery-service labeling-tool laboratory-automation operations-engineering python salesforce thermal-transfer universal-barcoding zebra zebra-label-printers zebra-printer zpl zpl2png
Last synced: 15 Nov 2024
https://github.com/daylily-informatics/img_stitcher_day
Playing around with merging images taken of the outside of a tube.
Last synced: 15 Nov 2024
https://github.com/daylily-informatics/github_markdown_text_colorizer
Service to return images of text where the input text can have font, font size and color set
Last synced: 15 Nov 2024
https://github.com/daylily-informatics/snakemake-executor-plugin-pcluster-slurm
slurm executor for use by snakemake when running on the slurm flavor which is unique to aws parallel cluster slrum pcluster.
aws aws-parallel-cluster pcluster plugin sbatch slurm snakemake snakemake-plugin
Last synced: 22 Oct 2024
https://github.com/daylily-informatics/jinja2_fmt_day
Simple tool to standardize the indentation of jinja2 files.
Last synced: 15 Nov 2024
https://github.com/daylily-informatics/bloom
Templated Abstract Polymorphic (and opinionated) LIMS
Last synced: 15 Nov 2024
https://github.com/daylily-informatics/yaml_config_day
Slim Python yaml Config Manager
configuration python python3 yaml yaml-config yaml-configs yaml-configuration yaml-configurations
Last synced: 15 Nov 2024
https://github.com/daylily-informatics/gravity_well
Obsidian app to import arbitrary txt, md or pdf files from local filesystem to create new notes for each. With auto tagging and re-formatting notes created from imported files .
Last synced: 15 Nov 2024
https://github.com/daylily-informatics/metapub_peep
Slim fastapi / jinja2 web application to expose metapub command line functionality.
Last synced: 15 Nov 2024
https://github.com/daylily-informatics/xcures_day
python wrapper for the xcures REST api
Last synced: 15 Nov 2024