https://github.com/KrishnaswamyLab/PHATE

PHATE (Potential of Heat-diffusion for Affinity-based Transition Embedding) is a tool for visualizing high dimensional data.

data-visualization dimensionality-reduction manifold-learning single-cell unsupervised-learning

Last synced: 08 Apr 2025

https://github.com/krishnaswamylab/magic

MAGIC (Markov Affinity-based Graph Imputation of Cells), is a method for imputing missing values restoring structure of large biological datasets.

Last synced: 14 Jan 2026

https://github.com/KrishnaswamyLab/MAGIC

MAGIC (Markov Affinity-based Graph Imputation of Cells), is a method for imputing missing values restoring structure of large biological datasets.

Last synced: 08 Apr 2025

https://github.com/KrishnaswamyLab/TrajectoryNet

TrajectoryNet: A Dynamic Optimal Transport Network for Modeling Cellular Dynamics

Last synced: 27 Mar 2025

https://github.com/KrishnaswamyLab/sparc

Denoising spatial transcriptomics data

Last synced: 30 Apr 2025