Projects in Awesome Lists by MPUSP
A curated list of projects in awesome lists by MPUSP .
https://github.com/mpusp/snakemake-crispr-guides
A Snakemake workflow for the design of small guide RNAs (sgRNAs) for CRISPR applications.
bioinformatics-pipeline crispr crispr-design guide-rna-library python3 r-markdown snakemake snakemake-workflow workflow
Last synced: 27 Apr 2026
https://github.com/mpusp/snakemake-ms-proteomics
Pipeline for automatic processing and quality control of mass spectrometry data
bioinformatics conda mass-spectrometry pipeline proteomics snakemake
Last synced: 11 Feb 2026
https://github.com/mpusp/snakemake-simple-mapping
A Snakemake workflow for the mapping of reads to reference genomes, minimalistic and simple.
bowtie2 bwa-mem2 genomics mapping next-generation-sequencing snakemake snakemake-workflow star-alignment variant-calling
Last synced: 11 Mar 2026