Projects in Awesome Lists by datasnakes
A curated list of projects in awesome lists by datasnakes .
https://github.com/datasnakes/orthoevolution
An easy to use and comprehensive python package which aids in the analysis and visualization of orthologous genes. 🐵
bash bioinformatics biology biosql blast data-science ftp genetics ncbi orthologs orthologues orthology orthology-inference pbs phylogenetics python qsub sequence-alignment sge shell
Last synced: 15 Apr 2025
https://github.com/datasnakes/renv
Creating virtual environments for R.
biohackathon cli hackathon package-management project-environment python r renv reproducible-research virtual-environment
Last synced: 11 Sep 2025
https://github.com/datasnakes/beri
beRi "beri environments for R installations" is an R environment, R installation, and R package management system for R
biohackathon cli environment hackathon hackseq18 package-management package-manager python3 r
Last synced: 15 Apr 2025
https://github.com/datasnakes/beRi
beRi "beri environments for R installations" is an R environment, R installation, and R package management system for R
biohackathon cli environment hackathon hackseq18 package-management package-manager python3 r
Last synced: 01 May 2025
https://github.com/datasnakes/rinse
A configurable installer CLI for installing R from source (sudo and non-sudo).
cli installer package-management r r-programming
Last synced: 15 Oct 2025
https://github.com/datasnakes/roxygen-tags
A comprehensive list of roxygen tags and their use cases. 🏷️
documentation roxygen roxygen-documentation roxygen2 tags
Last synced: 04 Feb 2026
https://github.com/datasnakes/github-readme-templates
Easy to use README templates for a python project or python module
github markdown readme readme-template
Last synced: 15 Apr 2025
https://github.com/datasnakes/htseq-count-cluster
A cli for running multiple qsub jobs with HTSeq's htseq-count on a cluster.
cli cluster htseq htseq-count htseq-count-cluster rnaseq sge
Last synced: 03 Oct 2025
https://github.com/datasnakes/python-hands-on-tutorial
A hands-on Python3 tutorial. 🐍
biology interactive python-tutorial python3
Last synced: 28 May 2026
https://github.com/datasnakes/rut
A cli of r utilities aimed at package and .Rprofile management.
cli cran jetpack manager package-management packrat projects r rprofile-management
Last synced: 25 Apr 2026
https://github.com/datasnakes/cookiecutter-pypackage-travisci
A cookiecutter template for creating a python project & using travis ci for continuous integration.
cookiecutter cookiecutter-template python python-package travis-ci
Last synced: 18 Apr 2026
https://github.com/datasnakes/cookiecutter-orthoevol
A cookiecutter template for the OrthoEvol python package
bioinformatics cookiecutter cookiecutter-template data-science python
Last synced: 12 Sep 2025
https://github.com/datasnakes/beri-isc-proposal
An isc proposal to the R Consortium to elicit their support for beRi.
bioinformatics isc-proposal r r-consortium r-core reproducible-research ropensci
Last synced: 01 Jun 2026
https://github.com/datasnakes/rnaseek
A shiny app to perform single and multifactor differential analysis using DESeq2, edgeR, and limma
count-table deseq2 htseq r rna-seq rnaseq shiny shiny-apps
Last synced: 09 Jun 2026
https://github.com/datasnakes/open-source-ideas
💡 Submit ideas for science-related projects or packages here. 💡
ideas open-science open-source python rstats
Last synced: 05 Jun 2026
https://github.com/datasnakes/pydavid
A python3 wrapper around the DAVID API
Last synced: 04 Dec 2025
https://github.com/datasnakes/py3utils
Useful python utils for the everyday programmer.
Last synced: 12 Jun 2026
https://github.com/datasnakes/orthoevol-snakemake
A snakemake workflow for the OrthoEvol python package.
orthoevol orthology-inference snakemake snakemake-pipelines snakemake-workflow
Last synced: 06 Jun 2026
https://github.com/datasnakes/datasnakes.github.io
This is the website for the Datasnakes.
Last synced: 18 Jul 2026
https://github.com/datasnakes/hackseq19docs
View team beRi's hackseq19 presentation. 📄
Last synced: 16 Apr 2026
https://github.com/datasnakes/shinyconfig
An R package that aids in the configuration and setup of shiny apps.
Last synced: 15 Jun 2025
https://github.com/datasnakes/snakemold
cookiecutter management project-management python3
Last synced: 23 Jun 2025
https://github.com/datasnakes/archives
:skull: Where everything goes to die. :skull:
archive archived archives python3
Last synced: 06 Jun 2026
https://github.com/datasnakes/snakeutils
A collection of tools used by the Datasnakes in their various github projects.
Last synced: 10 Jun 2026