https://github.com/dipy/dipy

DIPY is the paragon 3D/4D+ medical imaging library in Python. Contains generic methods for spatial normalization, signal processing, machine learning, statistical analysis and visualization of medical images. Additionally, it contains specialized methods for computational anatomy including diffusion, perfusion and structural imaging.

bundles contextual-enhancement denoising diffusion-mri dki dti machine-learning medical-imaging microstructure neuroanatomy neuroimaging patch2self python registration segmentation self-supervised-learning spherical-harmonics tracking tractography tractometry

Last synced: 21 Oct 2025

https://github.com/dipy/GPUStreamlines

Last synced: 01 May 2025

https://github.com/dipy/miccai23

Last synced: 23 May 2026

https://github.com/dipy/bl_apps_dipy_fit_ivim

Brainlife wrapper app for dipy_fit_ivim workflows.

diffusion-mri dipy

Last synced: 24 May 2026

https://github.com/dipy/bl_apps_dipy_gibbs_ringing

Brainlife wrapper app for dipy_gibbs_ringing workflows.

diffusion-mri diffusion-preprocessing dipy

Last synced: 26 May 2026

https://github.com/dipy/bl_apps_dipy_denoise_nlmeans

Brainlife wrapper app for dipy_denoise_nlmeans workflows.

diffusion-mri diffusion-preprocessing dipy

Last synced: 27 May 2026

https://github.com/dipy/bl_apps_dipy_median_otsu

Brainlife wrapper app for dipy_median_otsu workflows.

diffusion-mri diffusion-preprocessing dipy

Last synced: 28 May 2026

https://github.com/dipy/bl_apps_dipy_denoise_lpca

Brainlife wrapper app for dipy_denoise_lpca workflows.

diffusion-denoising diffusion-mri diffusion-preprocessing dipy

Last synced: 28 May 2026

https://github.com/dipy/bl_apps_dipy_track_pft

Brainlife wrapper app for dipy_track_pft workflows.

diffusion-mri dipy tracking tractography

Last synced: 28 May 2026

https://github.com/dipy/bl_apps_dipy_recobundles

Brainlife wrapper app for dipy_recobundles workflows.

diffusion-mri dipy segmentation

Last synced: 28 May 2026

https://github.com/dipy/cookiecutter-bl-dipy-apps

Cookiecutter to generate brainlife apps for dipy

Last synced: 29 May 2026

https://github.com/dipy/docs.dipy.org

DIPY documentation generated html

api diffusion-mri medical-imaging mri

Last synced: 12 Mar 2026

https://github.com/dipy/bl_apps_dipy_reslice

Brainlife wrapper app for dipy_reslice workflows.

diffusion-mri diffusion-preprocessing dipy

Last synced: 05 Jun 2026

https://github.com/dipy/bl_apps_dipy_fit_csa

Brainlife wrapper app for dipy_fit_csa workflows

diffusion-mri diffusion-reconstruction dipy

Last synced: 23 May 2026

https://github.com/dipy/certificates.dipy.org

Small webapp to manage DIPY certificates from the workshop

Last synced: 24 May 2026