Projects in Awesome Lists by dmnfarrell
A curated list of projects in awesome lists by dmnfarrell .
https://github.com/dmnfarrell/pandastable
Table analysis in Tkinter using pandas DataFrames.
data-analysis dataframe pandas plotting scientific tkinter
Last synced: 14 May 2025
https://github.com/dmnfarrell/tkintertable
A pure Python library for adding tables to a Tkinter application
Last synced: 16 May 2025
https://github.com/dmnfarrell/tablexplore
Table analysis and plotting application written in PySide2/PyQt5
data-analysis data-science dataframe pandas plotting pyqt5 pyside2 python qt
Last synced: 01 Aug 2025
https://github.com/dmnfarrell/epitopepredict
Python package and command line tool for epitope prediction
bioinformatics epitope-prediction-methods immunology
Last synced: 15 Apr 2025
https://github.com/dmnfarrell/teaching
scripts and notes for learning
bioinformatics bokeh jupyter microbiology python pyviz
Last synced: 15 Apr 2025
https://github.com/dmnfarrell/smallrnaseq
small rna-seq analysis package
bioinformatics genomics mirna python rna-seq sequencing smallrna
Last synced: 15 Apr 2025
https://github.com/dmnfarrell/pybioviz
bioinformatics visualization tools with pyviz/bokeh
bioinformatics bokehplots ngs python pyviz
Last synced: 15 Apr 2025
https://github.com/dmnfarrell/pathogenie
Desktop tool for microbial genome annotation and gene detection
amr antibiotic-resistance bioinformatics genome-annotation genomics pyqt5
Last synced: 15 Apr 2025
https://github.com/dmnfarrell/snipgenie
command line and desktop tool for microbial variant calling
bioinformatics genomics ngs-pipeline pyqt5 pyside2 python variant-calling
Last synced: 15 Apr 2025
https://github.com/dmnfarrell/epitopemap
A web application for visualizing MHC binding predictions
Last synced: 26 Jun 2025
https://github.com/dmnfarrell/mtbc_analyses
Code for genomics analysis of MTBC locii.
Last synced: 23 Aug 2025
https://github.com/dmnfarrell/mtbdiff
Characterization of Mycobacterium tuberculosis complex species using mummer and nucdiff
bioinformatics genomics microbiology mycobacterium-tuberculosis
Last synced: 15 Apr 2025
https://github.com/dmnfarrell/peat
PEAT is a suite of programs for capturing, analyzing and predicting biophysical characteristics of proteins
Last synced: 14 Mar 2026
https://github.com/dmnfarrell/tracebtb
M.bovis WGS surveillance tool.
epidemiology geopandas gis pyqt5 python wgs
Last synced: 24 Dec 2025
https://github.com/dmnfarrell/gordon-group
scripts and data for gordon group papers
Last synced: 16 Jul 2025
https://github.com/dmnfarrell/batchfilerename
Batch file renaming utility written in Python
Last synced: 10 Oct 2025
https://github.com/dmnfarrell/btbabm
Agent based model for bovine TB spread in herds
agent-based-modeling bovine-tb epidemiology
Last synced: 14 Apr 2026
https://github.com/dmnfarrell/amr-project
notebooks and code for AMR gene detection and other tools
Last synced: 20 Jun 2025
https://github.com/dmnfarrell/nanopore-project
scripts/notes for bacterial nanopore sequencing
Last synced: 23 Apr 2026