Projects in Awesome Lists by glotzerlab
A curated list of projects in awesome lists by glotzerlab .
https://github.com/glotzerlab/hoomd-blue
Molecular dynamics and Monte Carlo soft matter simulation on GPUs.
conda-forge cuda docker gpu hard-particle hoomd-blue molecular-dynamics monte-carlo-simulation particle-system python simulation singularity
Last synced: 15 May 2025
https://github.com/glotzerlab/freud
Powerful, efficient particle trajectory analysis in scientific Python.
analysis computational-chemistry computational-physics data-analysis molecular-dynamics monte-carlo-simulation particle-system python science scientific-computing spatial-analysis
Last synced: 15 May 2025
https://github.com/glotzerlab/signac
Manage large and heterogeneous data spaces on the file system.
data data-management database reproducibility
Last synced: 08 Apr 2025
https://github.com/glotzerlab/fresnel
Publication quality path tracing in real time.
cuda optix path-tracing python simulation soft-matter
Last synced: 13 Oct 2025
https://github.com/glotzerlab/signac-flow
Workflow management for signac-managed data spaces.
Last synced: 12 Apr 2025
https://github.com/glotzerlab/hoomd-examples
HOOMD-blue example scripts.
hard-particle hoomd-blue jupyter molecular-dynamics monte-carlo-simulation particle-system python simulation tutorial
Last synced: 10 Jun 2025
https://github.com/glotzerlab/rowan
A Python package for working with quaternions.
Last synced: 06 Sep 2025
https://github.com/glotzerlab/gsd
Read and write GSD files for use with HOOMD-blue.
binary file-format gsd hoomd python
Last synced: 06 Apr 2025
https://github.com/glotzerlab/coxeter
Collection of tools to help initialize and manipulate shapes.
computational-geometry geometry physics polygons polyhedra shapes
Last synced: 09 Jul 2025
https://github.com/glotzerlab/signac-dashboard
Rapidly visualize signac projects through a customizable dashboard interface.
analysis dashboard data flask signac visualization
Last synced: 28 Feb 2026
https://github.com/glotzerlab/signac-examples
Examples for the signac framework.
Last synced: 09 Jul 2025
https://github.com/glotzerlab/freud-examples
Examples for the freud library.
analysis freud glotzer materials-science molecular-dynamics simulation
Last synced: 15 Mar 2026
https://github.com/glotzerlab/ovito-scripts
A collection of scripts for pairing OVITO with freud and other Glotzer lab packages
Last synced: 09 Jul 2025
https://github.com/glotzerlab/plato
Efficient visualization of particle data supporting several rendering engines.
2d 3d library matplotlib opengl povray python raytracing threejs visualization
Last synced: 09 Apr 2025
https://github.com/glotzerlab/pythia
A library to generate numerical descriptions of particle systems.
Last synced: 09 Jul 2025
https://github.com/glotzerlab/software
Conda recipes for Glotzer Lab software on HPC resources
Last synced: 20 Aug 2025
https://github.com/glotzerlab/hoomd-benchmarks
A collection of benchmarks for HOOMD-blue
Last synced: 09 Jul 2025
https://github.com/glotzerlab/garnett
Collection of file parsers and writers for particle trajectory formats used by the Glotzer Group.
Last synced: 09 Jul 2025
https://github.com/glotzerlab/signac-docs
Documentation for the signac framework.
Last synced: 14 Mar 2025
https://github.com/glotzerlab/hoomd-workshop
Interactive workshop teaching HOOMD-blue.
Last synced: 24 Jun 2025
https://github.com/glotzerlab/synced_collections
Add transparent file synchronization to standard Python collections
Last synced: 09 Jul 2025
https://github.com/glotzerlab/dupin
Package for detecting rare events in molecular simulations.
Last synced: 09 Jul 2025
https://github.com/glotzerlab/plato-gallery
Example notebooks for the plato visualization project
2d 3d data-visualization examples jupyter-notebooks python visualization
Last synced: 24 Aug 2025
https://github.com/glotzerlab/hoomd-validation
Longer Running Validation Tests for HOOMD-blue
Last synced: 09 Jul 2025
https://github.com/glotzerlab/fsph
Library to quickly compute series of complex spherical harmonics.
Last synced: 09 Jul 2025
https://github.com/glotzerlab/spatula
Python package for calculation of symmetry based order parameters in molecular simulation systems.
Last synced: 25 Oct 2025
https://github.com/glotzerlab/libgetar
Library to read and write GEneric Trajectory ARchives, a binary data format designed for efficient, extensible storage of trajectory data.
Last synced: 09 Jul 2025
https://github.com/glotzerlab/fresnel-examples
Example notebooks for fresnel
Last synced: 09 Jul 2025
https://github.com/glotzerlab/parsnip
Minimal library for parsing CIF files in Python.
Last synced: 02 Jan 2026
https://github.com/glotzerlab/hoomd-component-template
Template repository for HOOMD-blue C++ components.
Last synced: 02 Jan 2026
https://github.com/glotzerlab/glotzerlab_citations
Collection of citations commonly used in papers in the Glotzer group
Last synced: 06 Jul 2025
https://github.com/glotzerlab/peact
A library for reactive programming in Python.
Last synced: 13 Jun 2025
https://github.com/glotzerlab/signac-workshop
Interactive signac tutorials.
Last synced: 14 Mar 2025
https://github.com/glotzerlab/fedorov
A python package to initialize different crystal structures
Last synced: 14 Mar 2025
https://github.com/glotzerlab/flowws-unit-cell
Workflow for interactively identifying crystal unit cells.
Last synced: 14 Mar 2025
https://github.com/glotzerlab/pre-commit-clang-format
Pre-commit hooks for clang-format
Last synced: 19 Mar 2026
https://github.com/glotzerlab/plato-containers
Container building scripts for plato CI and demonstrations
Last synced: 01 Mar 2026
https://github.com/glotzerlab/signac-benchmarks
Benchmarks for the core signac application.
Last synced: 24 Apr 2026
https://github.com/glotzerlab/workflows
House commonly used GitHub actions and workflows.
Last synced: 30 Aug 2025
https://github.com/glotzerlab/renovate-config
Common Renovate configuration for glotzerlab.
Last synced: 12 Feb 2026
https://github.com/glotzerlab/random123
Tracking DE Shaw Research's random123 library
Last synced: 29 Dec 2025