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Awesome

An open API service indexing awesome lists of open source software.

Projects in Awesome Lists by intermine

A curated list of projects in awesome lists by intermine .

https://github.com/intermine/bluegenes

A friendly next-generation interface for Genomic data discovery powered by InterMine

cljs clojure clojurescript genomics intermine

Last synced: 16 May 2025

https://github.com/intermine/interminer

R package for InterMine

biology genomics intermine r

Last synced: 08 Jul 2025

https://github.com/intermine/intermine-ws-python-docs

Tutorials for the InterMine Python web client

Last synced: 13 May 2025

https://github.com/intermine/internships

InterMine GSoC informational mini-site for gsoc mentors and students

Last synced: 24 Dec 2025

https://github.com/intermine/cdn

JavaScript, Cascading Style Sheet Content Delivery Network

Last synced: 13 May 2025

https://github.com/intermine/im-tables

Dynamic Result Table Library

Last synced: 13 May 2025

https://github.com/intermine/imjs

InterMine Generic WebService Client Library

Last synced: 13 May 2025

https://github.com/intermine/training-workshops

List of InterMine training workshops and links to repos / materials

Last synced: 13 May 2025

https://github.com/intermine/intermine-registry

Registry to store and browse all known instances of InterMine. Developed during GSoC 2017 by Leonardo Kuffo

genomics google-summer-of-code heroku intermine mongodb node-js open-source swagger-api swagger-docs webservices

Last synced: 13 May 2025

https://github.com/intermine/intermine-ws-python

InterMine Client library in Python

bioinformatics genomics python

Last synced: 25 Oct 2025

https://github.com/intermine/neo4j

Project to develop Neo4j as the backing store for InterMine

intermine neo4j

Last synced: 13 May 2025

https://github.com/intermine/training-portal

Portal for training resources for InterMine.

Last synced: 09 Mar 2026

https://github.com/intermine/intermine-homepage-2017

InterMine's new homepage as of 2017

Last synced: 26 Jun 2025

https://github.com/intermine/im-docs

Documentation for the InterMine project

Last synced: 25 Aug 2025

https://github.com/intermine/outreach

Repo for ideas and community discussions about InterMine-related outreach and communities

Last synced: 25 Feb 2026

https://github.com/intermine/im-tables-3

clojurescript library to display and manipulate intermine query results on a webpage

intermine

Last synced: 04 Jul 2025

https://github.com/intermine/generator-bluegenes-tool

Scaffold generator for BlueGenes tools

Last synced: 13 May 2025

https://github.com/intermine/docker-intermine-gradle

Docker for InterMine

Last synced: 09 Mar 2026

https://github.com/intermine/bluegenes-ux-ideas

Ideas for improvement in ux-ui

Last synced: 18 Mar 2026

https://github.com/intermine/similarity

similarity

Last synced: 13 Jun 2025

https://github.com/intermine/bluegenes-tissue-expression-visualizer

Visualization for BlueGenes of tissue expression

bluegenes bluegenes-tool gsoc-2019

Last synced: 13 May 2025

https://github.com/intermine/biotestmine

An example InterMine - for demoing and testing

Last synced: 13 May 2025

https://github.com/intermine/biovalidator

a library to validate biological data formats

Last synced: 16 Oct 2025

https://github.com/intermine/intermine_compose

Repo to handle docker orchestration in the cloud

Last synced: 13 May 2025

https://github.com/intermine/intermine-user-docs

Documentation for using an InterMine webapp.

Last synced: 13 May 2025

https://github.com/intermine/intermine_boot

A little app to spin up local containers in which to build an InterMine

Last synced: 02 Mar 2026

https://github.com/intermine/intermine_cloud

repo for cloud infrastructure

Last synced: 13 May 2025

https://github.com/intermine/community-call-archives

Archive of InterMine Community Call agendas and notes

Last synced: 03 Apr 2026

https://github.com/intermine/mineviewer

A Perl webapp for viewing data in InterMine datawarehouses

Last synced: 27 Apr 2026

https://github.com/intermine/design-materials

A collection of paper diagrams, presentations, sketches, Photoshop designs and websites for InterMine

Last synced: 10 Feb 2026

https://github.com/intermine/intermine-steps

InterMine 2.0 Prototype preserving history of Steps

Last synced: 21 Jul 2025

https://github.com/intermine/intermine-trac-theme

http://intermine.org

Last synced: 29 Apr 2026

https://github.com/intermine/bluegenes-tool-store

BlueGenes' Tool API server. Used as dependency in BlueGenes but can also be used standalone.

Last synced: 26 Apr 2026

https://github.com/intermine/cytoscape-intermine

Widget to allow intermine gene interactions to be viewed using cytoscape.js

Last synced: 16 Apr 2026

https://github.com/intermine/intermine-scripts

All scripts that used to be in the main intermine repository in bio/scripts and intermine/scripts

Last synced: 28 Dec 2025

https://github.com/intermine/intermine_configurator

a group of web services used to create an InterMine instance

Last synced: 13 May 2025

https://github.com/intermine/intermine-ws-java

Java client for InterMine

bioinformatics java

Last synced: 21 Apr 2026

https://github.com/intermine/ratportal

A Web-Servicer based version of RGD portal pages

Last synced: 21 Apr 2026

https://github.com/intermine/listbasedquerybuilder

A query bulder based on navigating from list to list

Last synced: 27 Apr 2026

https://github.com/intermine/intermine-ws-java-docs

Examples for using the InterMine Java client

Last synced: 13 Aug 2025

https://github.com/intermine/intermine-embedding-examples

InterMine Web Services demos and examples through the use of imjs or widgets.

Last synced: 29 Apr 2026

https://github.com/intermine/iodocs

Fork Of Mashery's IODocs project

Last synced: 11 Jun 2026

https://github.com/intermine/interminer-workshop

InterMineR exercises for training workshops

Last synced: 25 Apr 2026

https://github.com/intermine/treesearchautocomplete

Query Builder Demo with Autocompleting paths

Last synced: 12 Jul 2025

https://github.com/intermine/gmod-rpc-intermine

InterMine's GMOD-RPC modules

Last synced: 22 Jun 2025

https://github.com/intermine/wizard

early mockups for intermine data import wizard

Last synced: 07 Apr 2026

https://github.com/intermine/covidmine

CovidMine

Last synced: 13 Mar 2025

https://github.com/intermine/humanmine-bio-sources

Data sources for HumanMine

Last synced: 13 May 2025

https://github.com/intermine/identifiers-widget

embeddable js widget to display identifiers.org info on your page

Last synced: 03 Oct 2025

https://github.com/intermine/gmod-rpc-adaptor

Adaptor for processing GMOD-RPC calls as InterMine webservice requests

Last synced: 04 Oct 2025

https://github.com/intermine/imjs-docs

Last synced: 27 Dec 2025

https://github.com/intermine/intermine-apps-c

InterMine apps built using Bower and Grunt

Last synced: 03 Jul 2025

https://github.com/intermine/micklem-lab-site

Micklem Lab site on Blað CMS

Last synced: 04 Jul 2025

https://github.com/intermine/intermod-logo

A logo for the InterMOD project

Last synced: 22 Feb 2026

https://github.com/intermine/flymine

FlyMine - an InterMine instance with Drosophila data

Last synced: 10 Jan 2026

https://github.com/intermine/intermine-ws-bio-ruby

Bio Extensions for the Ruby WS client

Last synced: 07 Oct 2025

https://github.com/intermine/humanmine-sitemap

sitemaps for humanmine

Last synced: 18 Feb 2026

https://github.com/intermine/facetted-query-builder

A facetted query builder.

Last synced: 15 Mar 2026

https://github.com/intermine/dojotreebrowser

Proof of concept for ajax-based query builder

Last synced: 27 Oct 2025

https://github.com/intermine/bluegenes-tool-cytoscape

Thin wrapper around the cytoscape-intermine library to present intermine gene & protein interaction networks in bluegenes

bluegenes-tool

Last synced: 29 Jan 2026

https://github.com/intermine/bluegenes-mine-config-checker

checks intermines on the registry for bluegenes readyness

Last synced: 21 Apr 2026

https://github.com/intermine/intermine-report-widgets

A node.js reference implementation of a service for loading and rendering Report Widgets (Displayers).

Last synced: 24 Apr 2026

https://github.com/intermine/intermine-list-widgets

Client for embedding InterMine widgets (ws_widgets)

Last synced: 25 Apr 2026

https://github.com/intermine/dagify

Render DAGs in interesting ways

Last synced: 27 Apr 2026

https://github.com/intermine/intermine-bio-sources-old

Data parsers not in use

Last synced: 29 Apr 2026

https://github.com/intermine/intermine-api-loader

Simplify loading of JS and CSS dependencies

Last synced: 30 Apr 2026

https://github.com/intermine/ci-scripts

common intermine testmine install scripts used in multiple repos.

Last synced: 13 Mar 2025

https://github.com/intermine/intermine-perl-api

Items generation library, written in Perl

Last synced: 20 Apr 2026

https://github.com/intermine/experimental-mines

Collection of experimental mines

Last synced: 13 Mar 2025

https://github.com/intermine/covidmine-bio-sources

CovidMine Bio Sources

Last synced: 24 Apr 2026

https://github.com/intermine/intermine-ws-bio-perl

Bio Extensions For the InterMine Perl Client

Last synced: 08 Jun 2026

https://github.com/intermine/bluegenes-tool-test

STOP! THIS TOOL IS FOR BLUEGENES INTERNAL DEVELOPER USE.

Last synced: 01 Aug 2025

https://github.com/intermine/cytoscape-graph-displayer

This application accepts cytoscape.js json markup and displays graphs..

Last synced: 13 Sep 2025

https://github.com/intermine/bluegenesprotvista

wrapper around the uniprot protvista protein feature viewer

bluegenes-tool

Last synced: 17 Feb 2026

https://github.com/intermine/bosc-abstracts

BOSC abstracts for InterMine projects

Last synced: 27 Feb 2026

https://github.com/intermine/intermine-sitemaps

generates a sitemap for your (jsp-based) intermine

Last synced: 07 Oct 2025

https://github.com/intermine/ncbi-sequence-grabber

to download sequences for CovidMine

Last synced: 07 Oct 2025

https://github.com/intermine/itemsxml.py

Items generation library, written in python

Last synced: 25 Apr 2026

https://github.com/intermine/flymine-datasets

xml file with datasets/sources description, loaded as a static source

Last synced: 14 Mar 2026