Projects in Awesome Lists by mfcovington
A curated list of projects in awesome lists by mfcovington .
https://github.com/mfcovington/pubmed-lookup
Lookup PubMed records and make Publication objects with info about a scientific publication
Last synced: 04 Apr 2025
https://github.com/mfcovington/djangocms-shiny-app
A Django app for adding R Shiny apps to a Django site with django CMS-specific features
Last synced: 04 Apr 2025
https://github.com/mfcovington/django-taggit-helpers
Django admin helper classes for django-taggit tags
Last synced: 27 Feb 2026
https://github.com/mfcovington/auto_barcode
Extracts fastq reads for specified barcode(s) from one or multiple FASTQ files
Last synced: 06 Jul 2025
https://github.com/mfcovington/jtk-cycle
Bug fix for JTK_CYCLE: Phase estimation breaks when multiple best phases span dawn.
Last synced: 11 Apr 2025
https://github.com/mfcovington/djangocms-genome-browser
A Django app for incorporating a Dalliance genome browser into a Django site with django CMS-specific features
Last synced: 04 Apr 2025
https://github.com/mfcovington/provean-assembly-line
Find amino acid substitutions from SNPs and run PROVEAN to estimate functional severity
Last synced: 04 Apr 2025
https://github.com/mfcovington/log-reproducible
A Perl 5 module to help improve reproducibility
Last synced: 11 Apr 2025
https://github.com/mfcovington/number-rangetracker
A Perl 5 module to keep track of numerical ranges quickly
Last synced: 08 Apr 2025
https://github.com/mfcovington/djangocms-lab-publications
A Django app for adding sets of scientific publications with PubMed metadata to a Django site with django CMS-specific features
Last synced: 08 Apr 2025
https://github.com/mfcovington/django-system-maintenance
Django app to document and track the administration and maintenance of computer systems
Last synced: 04 Apr 2025
https://github.com/mfcovington/django-revenue-tracker
A Django app to track transactions, royalties, and revenues
Last synced: 08 Apr 2025
https://github.com/mfcovington/djangocms-lab-carousel
A Django app for adding a carousel of recent papers, etc. to a Django site with django CMS-specific features
Last synced: 10 Sep 2025
https://github.com/mfcovington/perl-prereqinstaller
A Perl 5 module for installing missing modules explicitly loaded by a Perl script or module
Last synced: 14 Jul 2026
https://github.com/mfcovington/jquery-playground
I'm learning JavaScript and jQuery. Here are some of my mini projects for learning from tutorials, etc.
Last synced: 21 Jan 2026
https://github.com/mfcovington/django-project-home-templatetags
A collection of Django templatetags to flexibly incorporate links and breadcrumbs from app pages to the homepage of a project
boostrap4 bootstrap bootstrap3 breadcrumbs django template-tags templatetags
Last synced: 02 Mar 2026
https://github.com/mfcovington/extract-flanking-positions
Extract flanking positions from VCF file
Last synced: 01 Aug 2025
https://github.com/mfcovington/cosopt-assembly-line
Format expression data for COSOPT analysis, run COSOPT, and format the results.
Last synced: 18 Jul 2026
https://github.com/mfcovington/caps-finder
Finds potential sites for CAPS markers.
Last synced: 08 Apr 2025
https://github.com/mfcovington/perlbrew_automation
Let's automate perlbrew tasks when working with multiple versions of perl!
Last synced: 08 Apr 2025
https://github.com/mfcovington/net-google-calendar-freebusy
Get free/busy data from Google Calendar
Last synced: 08 Oct 2025
https://github.com/mfcovington/log-history
Make self-documenting scripts that track their own execution history
Last synced: 08 Apr 2025
https://github.com/mfcovington/genetic_drift
Web app to simulate genetic drift in allele frequency for a single polymorphism with two alleles
Last synced: 08 Apr 2025
https://github.com/mfcovington/django-loosely-coupled-generic-m2m-prototyping
Exploring loose coupling of apps with generic m2m relationships
Last synced: 15 Jun 2025
https://github.com/mfcovington/fixing_scripts_for_people
This is a collection of scripts that people have asked me to troubleshoot and fix. If all goes according to plan, each person will be a separate branch (with branching from and merging to that person's branch occurring when they send me an additional script).
Last synced: 22 Jan 2026
https://github.com/mfcovington/extract_genotype_specific_seq
You are in the wrong place. Go here:
Last synced: 08 Apr 2025
https://github.com/mfcovington/extract-seq-flanking-read
This tool will extract a snippet of sequence upstream of where the read maps to the reference sequence.
Last synced: 08 Apr 2025
https://github.com/mfcovington/bam-splitter
Split a bam file based on run/lane info
Last synced: 08 Apr 2025
https://github.com/mfcovington/djangocms-lab-tags
A Django app for consolidating content tagged with django-taggit tags within a Django site with django CMS-specific features
Last synced: 08 Apr 2025
https://github.com/mfcovington/coverage-profiler
Build and write coverage profiles
Last synced: 08 Apr 2025
https://github.com/mfcovington/djangocms-lab-data
A Django app for organizing data files and sets of data files within a Django site with django CMS-specific features
Last synced: 08 Apr 2025
https://github.com/mfcovington/bis180l_web
Course Website for UC Davis BIS180L
Last synced: 08 Apr 2025
https://github.com/mfcovington/django-markupfield-helpers
A set of Django helpers that make it easier to get up and running quickly with django-markupfield
Last synced: 03 May 2026
https://github.com/mfcovington/django-lab-members
A Django app to display lab personnel and information about them
Last synced: 05 Oct 2025
https://github.com/mfcovington/djangocms-lab-members
A Django app to extend django-lab-members with django CMS-specific features
Last synced: 11 Jul 2026
https://github.com/mfcovington/sublimetext2
My package settings, etc. for Sublime Text 2
Last synced: 21 Jan 2026
https://github.com/mfcovington/bins-to-bams
Merge population's bam files based on genotypic bins to create parental genotype bam files
Last synced: 30 Jan 2026
https://github.com/mfcovington/cheatsheets
A collection of code snippets, notes, etc. for various languages
Last synced: 15 Feb 2026
https://github.com/mfcovington/rclub-homework
Push your answers for R Club homework and exercises here!
Last synced: 17 Feb 2026
https://github.com/mfcovington/django-temperature-monitor
A Django app to simultaneously monitor multiple La Crosse Alerts sensors and keep an extended history of data points
Last synced: 12 Jun 2026
https://github.com/mfcovington/django-compatible-index-calculator
A Django app for identifying compatible index sequences for high-throughput sequencing experiments
Last synced: 01 Aug 2025
https://github.com/mfcovington/noise-reduction-for-snps-from-pop
Noise-reduction for SNPs derived from a population
Last synced: 17 Aug 2025
https://github.com/mfcovington/proxa
Proxa: A Protocols.io skill for Amazon's Alexa
Last synced: 24 Aug 2025