Projects in Awesome Lists by mlund
A curated list of projects in awesome lists by mlund .
https://github.com/mlund/spheretree
Sphere-Tree Construction Toolkit (unofficial repository)
bounding-volume-hierarchy coarse-graining collision-detection octree polygons
Last synced: 03 Aug 2025
https://github.com/mlund/coulombgalore
C++ Library for Electrostatics
chemistry cpp14 dipole electrostatics intermolecular-interactions molecular-dynamics molecular-simulation monte-carlo multipole physics
Last synced: 28 Feb 2026
https://github.com/mlund/xmgr-resurrection
Patched XMGR plotting program for 64-bit machines
abandonware c graph math motif plotting wysiwyg xmgrace
Last synced: 03 Aug 2025
https://github.com/mlund/mega65-adventure
Playground for MEGA65 programming
6502-assembly c64 mega65 retrocomputing
Last synced: 03 Aug 2025
https://github.com/mlund/chemistry-notebooks
Jupyter notebooks for chemists
Last synced: 30 Oct 2025
https://github.com/mlund/si-thiocyanate
A Molecular Forcefield for Thiocyanate Anions in Water and at Interfaces
chemistry force-field molecular-dynamics molecular-simulation reproducible-science statistical-mechanics
Last synced: 28 Feb 2026
https://github.com/mlund/faunus-notebooks
Examples of Faunus running in Jupyter Notebooks
Last synced: 02 Mar 2026
https://github.com/mlund/si-lipase-structure-factors
Supporting information for Anisotropic Protein-Protein Interactions in Dilute and Concentrated Solutions
monte-carlo-simulation protein-protein-interaction saxs solution-stability
Last synced: 03 Aug 2025
https://github.com/mlund/si-crownether-ion-binding
Counter Intuitive Electrostatics upon Metal Ion Coordination to a Receptor with Two Homotopic Binding Sites
chemistry electrostatics molecular-dynamics reproducible-science theoretical-chemistry
Last synced: 03 Aug 2025
https://github.com/mlund/llvm-mos-template
Template for MEGA65-libc / LLVM-MOS projects
Last synced: 22 Feb 2026
https://github.com/mlund/retro-display
Embedded display drivers for retro computers
Last synced: 03 Aug 2025
https://github.com/mlund/duello
Osmotic second virial coefficient (𝐵₂) and dissociation constant (𝐾𝑑) for two rigid macromolecules
chemistry intermolecular-interactions protein-protein-interaction
Last synced: 12 Mar 2026
https://github.com/mlund/corona-vs-flu
Notebook for comparing corona vs flu
Last synced: 03 Aug 2025
https://github.com/mlund/tafelmusik
C++ library for playing C64 SID music on macOS
c64 commodore-64 cpp emulation music-player
Last synced: 15 Apr 2026
https://github.com/mlund/si-virtual-cell-model
Osmotic Pressure via a new Virtual Cell Model
Last synced: 03 Aug 2025
https://github.com/mlund/decaarginine
Supporting information for research related to deca-arginine
Last synced: 09 Feb 2026
https://github.com/mlund/crabsid
Commodore 64 SID player implemented in pure Rust
Last synced: 29 Jan 2026
https://github.com/mlund/template-for-supporting-information
Template for Notebooks for Supporting Information and Zenodo Deposition
Last synced: 07 Feb 2026
https://github.com/mlund/commodore64
Demos mainly by the group Unit2 from late 1980'ies
Last synced: 26 Feb 2026
https://github.com/mlund/jupyter-course-projectwork
Project Work for Reproducible and Interactive Data Science
Last synced: 10 Feb 2026
https://github.com/mlund/si-interferon-oligomerization
Electrostatics Drive Oligomerization and Aggregation of Human Interferon Alpha-2a
Last synced: 10 Feb 2026
https://github.com/mlund/rust_paa_dansk
En håndsrækning når du skriver Rust
Last synced: 10 Feb 2026
https://github.com/mlund/xdms-rs
A pure-Rust, dependency-free library for unpacking DMS (Disk Masher System) Amiga disk archives into raw ADF disk images.
Last synced: 13 Jun 2026
https://github.com/mlund/teokem-archeology
Collection of old fortran codes for computational chemistry
Last synced: 20 Jan 2026
https://github.com/mlund/pdb2xyz
Convert PDB files to coarse grained XYZ files
coarse-graining molecular-modeling pdb-files protein-structure
Last synced: 03 Aug 2025
https://github.com/mlund/si-anomalous_salt
Electronic Notebook: Anomalous Salt Dependence Reveals an Interplay of Attractive and Repulsive Electrostatic Interactions in α-synuclein Fibril Formation
Last synced: 03 Aug 2025
https://github.com/mlund/situs
Situs is a package for the modeling of atomic resolution structures into low-resolution density maps e.g. from electron microscopy, tomography, or small angle X-ray scattering
Last synced: 03 Aug 2025
https://github.com/mlund/si-caffeine-surface-area
Electronic Notebook: Surface Area Description of Salting-in andSalting-out of Caffeine
Last synced: 03 Aug 2025
https://github.com/mlund/eleven
Eleven interpreter implemented in Rust
6502 interpreter mega65 retrocomputing rust
Last synced: 03 Aug 2025
https://github.com/mlund/cpptricks
Collection of C++ snippets and header files that could be useful
cpp17 cxx iterator pairwise-calculations
Last synced: 03 Aug 2025
https://github.com/mlund/configurationswap
MC simulation of molecules with fluctuating conformations
Last synced: 03 Aug 2025
https://github.com/mlund/interatomic
Library for calculating inter-particle interactions
Last synced: 20 Jan 2026
https://github.com/mlund/si-polarization-switching-model
Supporting information for Polarized Switching Force Field Model for Membrane Translocation
Last synced: 23 Feb 2026
https://github.com/mlund/cosan
Supporting information for theoretical investigation of metallocarboranes
Last synced: 12 Oct 2025