Ecosyste.ms: Awesome
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Projects in Awesome Lists by moshi4
A curated list of projects in awesome lists by moshi4 .
https://github.com/moshi4/pycirclize
Circular visualization in Python (Circos Plot, Chord Diagram, Radar Chart)
bioinformatics chord-diagram circos comparative-genomics data-visualization dataviz genomics genomics-visualization matplotlib microbial-genomics phylogenetic-trees python radar-chart visualization
Last synced: 16 Nov 2024
https://github.com/moshi4/pygenomeviz
A genome visualization python package for comparative genomics
bioinformatics comparative-genomics genbank genomics genomics-visualization gff gff3 matplotlib microbial-genomics microbiology python synteny visualization
Last synced: 16 Nov 2024
https://github.com/moshi4/pymsaviz
MSA(Multiple Sequence Alignment) visualization python package for sequence analysis
bioinformatics genomics matplotlib msa multiple-sequence-alignment python sequence-alignment sequence-analysis visualization
Last synced: 16 Nov 2024
https://github.com/moshi4/aniclustermap
A tool for drawing ANI clustermap between all-vs-all microbial genomes
bioinformatics comparative-genomics genomics microbial-genomics phylogenetics phylogenomics python taxonomy visualization
Last synced: 16 Nov 2024
https://github.com/moshi4/cogclassifier
A tool for classifying prokaryote protein sequences into COG(Cluster of Orthologous Genes) functional category
bioinformatics cog comparative-genomics functional-analysis functional-annotation genome-analysis genomics microbial-genomics protein python visualization
Last synced: 16 Nov 2024
https://github.com/moshi4/phytreeviz
Simple phylogenetic tree visualization python package for phylogenetic analysis
bioinformatics biopython matplotlib phylogenetic-trees python visualization
Last synced: 16 Nov 2024
https://github.com/moshi4/gbkviz
Easy-to-use web application for visualization and comparison of genomes in Genbank file
bioinformatics biopython comparative-genomics genbank genomics genomics-visualization microbial-genomics python streamlit visualization webapp
Last synced: 27 Sep 2024
https://github.com/moshi4/cafeplotter
A tool for plotting CAFE5 gene family expansion/contraction result
bioinformatics evolution matplotlib molecular-evolution phylogenetic-trees phylogenetics phylogenomics python
Last synced: 09 Nov 2024
https://github.com/moshi4/pybarrnap
Python implementation of barrnap (Bacterial ribosomal RNA predictor)
bioinformatics genome-annotation genomics microbial-genomics microbiology python rna
Last synced: 09 Nov 2024
https://github.com/moshi4/pycirclize-data
pyCirclize example dataset repository
Last synced: 09 Nov 2024
https://github.com/moshi4/goatools-demo
goatools demo
bioinformatics go-enrichment goatools
Last synced: 09 Nov 2024
https://github.com/moshi4/pygenomeviz-data-v1
pygenomeviz v1 example dataset repository
Last synced: 09 Nov 2024