Projects in Awesome Lists by neurodata
A curated list of projects in awesome lists by neurodata .
https://github.com/neurodata/hyppo
Python package for multivariate hypothesis testing
data-science hacktoberfest hypothesis-testing independence ksample-testing python
Last synced: 14 Dec 2025
https://github.com/neurodata/sporf
This is the implementation of Sparse Projection Oblique Randomer Forest
classification cpp decision-trees python r random-forest
Last synced: 11 Mar 2026
https://github.com/neurodata/treeple
Scikit-learn compatible decision trees beyond those offered in scikit-learn
causal-inference causal-machine-learning cython decision-trees estimation machine-learning python random-forest scikit-learn
Last synced: 01 Apr 2026
https://github.com/neurodata/m2g
NeuroData's MRI to Graphs (m2g) - connectome estimation package and pipeline
Last synced: 30 Apr 2025
https://github.com/neurodata/ndstore
code for storing neurodata images and image annotations
aws data-store neuroscience redis s3
Last synced: 25 Apr 2025
https://github.com/neurodata/proglearn
NeuroData's package for exploring and using progressive learning algorithms
classification continual-learning decision-trees deep-learning deep-neural-networks domain-adaptation random-forests transfer-learning
Last synced: 04 Apr 2025
https://github.com/neurodata/brainlit
Method container for computational neuroscience on brains.
neuroimaging neuroscience python
Last synced: 06 Apr 2025
https://github.com/neurodata/marp-poster-template
Template for an academic poster using Marp
Last synced: 25 Apr 2025
https://github.com/neurodata/lol
package for dimensionality reduction under supervised data scenarios
Last synced: 25 Apr 2025
https://github.com/neurodata/nd_template
a blank template that can be cloned demonstrating ocp style
Last synced: 23 Aug 2025
https://github.com/neurodata/ardent
Affine and Regularized DEformative Numeric Transform (ardent) is a Python package for performing image registration using LDDMM.
Last synced: 24 Aug 2025
https://github.com/neurodata/df-dn-paper
Conceptual & empirical comparisons between decision forests & deep networks
classification decision-trees deep-learning deep-neural-networks machine-learning random-forests
Last synced: 21 Aug 2025
https://github.com/neurodata/neurodata.io
Homepage for NeuroData
neuroimaging outreach static-site website
Last synced: 22 Jul 2025
https://github.com/neurodata/checklists
this repo contains a number of checklists that we find very useful
Last synced: 26 Jan 2026
https://github.com/neurodata/uncertainty-forest
Conditional probability, conditional entropy, and mutual information estimation in Python. https://arxiv.org/abs/1907.00325
Last synced: 25 Apr 2025
https://github.com/neurodata/value-of-ood-data
The value of out-of-distribution data (ICML 2023)
computer-vision machine-learning ood-generalization statistical-learning
Last synced: 25 Apr 2025
https://github.com/neurodata/goat
A paper (in progress) on graph matching via optimal transport. On arxiv at https://arxiv.org/abs/2111.05366
graph-algorithms graph-alignment graphs networks python statistics
Last synced: 25 Jun 2025
https://github.com/neurodata/nd_ed
Collection of educational resources. Primarily focused on skills that are helpful in the NeuroData lab or the Neuro Data Design course at Johns Hopkins University.
Last synced: 15 Jun 2025
https://github.com/neurodata/sdtf
Exploring streaming options for decision trees and random forests. Based on scikit-learn fork.
classification decision-trees machine-learning streaming-data
Last synced: 25 Apr 2025
https://github.com/neurodata/honest-forests
Honest decision forests and trees implemented efficiently and scikit-learn compliant.
Last synced: 11 Mar 2026
https://github.com/neurodata/knorr
R bindings for knor
clustering-algorithm machine-learning parallel-computing
Last synced: 25 Apr 2025
https://github.com/neurodata/bilateral-connectome
A paper investigating bilateral symmetry of connectome networks.
connectome connectome-mapping network network-analysis neuroscience statistics
Last synced: 25 Apr 2025
https://github.com/neurodata/ndio-demos
Demo scripts for the ndio python library
Last synced: 25 Apr 2025
https://github.com/neurodata/mgc-matlab
a repo containing the code for mgc in matlab
Last synced: 25 Feb 2025
https://github.com/neurodata/kdg
Exploring and using kernel density algorithms
Last synced: 25 Apr 2025
https://github.com/neurodata/sic
Repository for extensible scientific container paper
Last synced: 05 Sep 2025
https://github.com/neurodata/prolearn
Prospective Learning: Learning for a Dynamic Future (NeurIPS 2024)
Last synced: 25 Apr 2025
https://github.com/neurodata/graphbook-code
Simple package storing functions useful in writing the graphstats book.
Last synced: 25 Apr 2025
https://github.com/neurodata/lifelong_learner
A repository to explore lifelong learning algorithms
Last synced: 06 Jun 2026
https://github.com/neurodata/pedigo-project-template
Cookiecutter project template
Last synced: 14 Apr 2025
https://github.com/neurodata/mcc
Reproducible code for "Multiscale Comparative Connectomics"
Last synced: 25 Apr 2025
https://github.com/neurodata/graph-explorer
Web-based graph analytics and some visualization
Last synced: 03 Jan 2026
https://github.com/neurodata/maggot_models
Modeling Drosophila larval connectomes
Last synced: 25 Apr 2025
https://github.com/neurodata/connectocross
Connectocross: statistical characterizations and comparisons of nanoscale connectomes across taxa (A paper in progress)
Last synced: 25 Apr 2025
https://github.com/neurodata/mrilab
A repository containing the dockerfile for a docker container running FSL, AFNI, FlashX, ndmg, and fngs on Ubuntu 16.04.
Last synced: 20 Jun 2026
https://github.com/neurodata/bgm
Repository for the paper "Bisected graph matching improves automated pairing of bilaterally homologous neurons from connectomes" https://direct.mit.edu/netn/article/doi/10.1162/netn_a_00287/113527/Bisected-graph-matching-improves-automated-pairing
connectomics graph-algorithms graph-analysis network-analysis network-science neuroscience python
Last synced: 14 Apr 2025
https://github.com/neurodata/task-similarity
a repo for exploring task-similarity and its utility for downstream inference
Last synced: 05 Aug 2025
https://github.com/neurodata/dos_and_donts
Experiments showing the do's and don'ts of connectome analysis
Last synced: 01 Jul 2025
https://github.com/neurodata/vesicle
reference synapse detection from serial electron microscopy data
Last synced: 25 Feb 2025
https://github.com/neurodata/lol-paper
code for generating figures in my Low-rank Optimal Linear Discriminant Analysis
Last synced: 01 Mar 2026
https://github.com/neurodata/llf_tidy_images
Clean image data for use in LifeLong Forests experiments
Last synced: 19 Apr 2026
https://github.com/neurodata/mgc-paper
MGC: multiscale graph correlation (pronounced "magic")
Last synced: 07 Mar 2026
https://github.com/neurodata/nd-faq
A collection of frequently asked questions (and answers) for prospective PhD students considering joining NeuroData and/or BME@JHU.
Last synced: 06 Feb 2026
https://github.com/neurodata/bohb_runs_sporf
BOHB Hyper-parameter sweeps comparing SPORF and sklearn-RF
Last synced: 04 Mar 2026
https://github.com/neurodata/datasets
a collection of scripts and resources for loading from different datasets, or for instructions on how to obtain the different datasets, in a variety of different languages.
Last synced: 25 Feb 2025
https://github.com/neurodata/ndtilecache
Caching gateway to connect a CATMAID (or other visualization) server to ndstore
Last synced: 19 Jun 2026
https://github.com/neurodata/maggot_connectome
Paper on modeling the larval Drosophila connectome
Last synced: 12 May 2026
https://github.com/neurodata/ndontology
Manage/query/update a MongoDB that contains the Allen Research Atlas Ontology
Last synced: 19 Oct 2025
https://github.com/neurodata/autogmm
Python package for automatic Gaussian mixture modeling
gaussian-mixture-models machine-learning model-selection
Last synced: 20 Jan 2026
https://github.com/neurodata/multiscale-network-test
Testing independence between network topology and nodal attributes
Last synced: 18 Jul 2025
https://github.com/neurodata/boss-export
Export data from BOSS in bulk from w/in BOSS AWS environment
Last synced: 13 Jun 2026
https://github.com/neurodata/primitives-interfaces
A mirror of D3M's primitives-interfaces
Last synced: 02 Apr 2026
https://github.com/neurodata/boutiques-tools
boutiques descriptors for neurodata tools
Last synced: 25 Apr 2025
https://github.com/neurodata/examples
Short examples of how to use our tools.
Last synced: 03 Mar 2026
https://github.com/neurodata/nd-overleaf-template
Overleaf latex template for NeuroData
Last synced: 04 Feb 2026
https://github.com/neurodata/tra
Repository for misc scripts associated with the TRA
Last synced: 10 Jun 2025
https://github.com/neurodata/combining-representations
A repository to implement, deploy and extend the method described in Learning to rank via combining representations.
Last synced: 02 Jul 2025
https://github.com/neurodata/graspy-misc
Random experiments related to GraSPy
Last synced: 29 May 2026
https://github.com/neurodata/clarityspiephotonicspaper
CLARITY paper for SPIE photonics conference
Last synced: 04 Feb 2026