Projects in Awesome Lists by pbenner
A curated list of projects in awesome lists by pbenner .
https://github.com/pbenner/autodiff
Autodiff is a numerical library for the Go programming language that supports automatic differentiation. It implements routines for linear algebra (vector/matrix operations), numerical optimization and statistics
automatic-differentiation bfgs cholesky-decomposition determinant eigenvalues gauss-jordan go golang gram-schmidt hessenberg-reduction linear-algebra linear-algebra-library newton-raphson numerical-optimization qr-algorithm rprop singular-value-decomposition special-functions statistical-models statistics
Last synced: 14 Oct 2025
https://github.com/pbenner/gonetics
Go / Golang Bioinformatics Library
bam-files bigwig bigwig-files bioinformatics bioinformatics-containers chip-seq coverage genomic-ranges golang golang-library gtf
Last synced: 16 Mar 2025
https://github.com/pbenner/threadpool
Go Thread Pool
go golang golang-library thread-pool
Last synced: 17 Jul 2025
https://github.com/pbenner/gp.regression
Gaussian Process Regression Library for GNU-R
Last synced: 28 Oct 2025
https://github.com/pbenner/tfbayes
Bayesian analysis of ChIP-Seq data for the identification of transcription factor binding sites.
Last synced: 09 Feb 2026
https://github.com/pbenner/double-descent
Simple examples of double descent (benign overfitting)
Last synced: 12 May 2026
https://github.com/pbenner/lisp-backprop
Old implementation of Backpropagation in Lisp
Last synced: 18 Mar 2026
https://github.com/pbenner/pycoordinationnet
A neural network model for materials property prediction based on coordination environments
Last synced: 26 Nov 2025
https://github.com/pbenner/torch-legendre
A Legendre Polynomial Layer for PyTorch
Last synced: 30 Aug 2025
https://github.com/pbenner/jigwig
Java BigWig Reader
bigwig bigwig-files bioinformatics java java-library
Last synced: 06 Oct 2025
https://github.com/pbenner/pyleapfrog
Leapfrog regularization for estimating sparse models in PyTorch
Last synced: 13 Sep 2025
https://github.com/BAMeScience/equitrain
Generic training script for Equiformer V2
Last synced: 05 May 2025
https://github.com/pbenner/variational-fg
Variational inference on factor graphs
Last synced: 16 Oct 2025
https://github.com/pbenner/adaptive-sampling.gp
Adaptive Sampling with Gaussian Processes
Last synced: 10 Jun 2026
https://github.com/pbenner/modhmm-segmentations
ModHMM Segmentations Repository
Last synced: 05 Mar 2026
https://github.com/pbenner/adaptive-sampling
Multibin adaptive sampling library
Last synced: 06 May 2026
https://github.com/pbenner/classifierperformance
Program to compute performance measures from predictions of a classifier
Last synced: 23 Sep 2025