https://github.com/phydev/phybio

Making phase-field modelling simpler.

biology phase-field physics

Last synced: 12 Jul 2025

https://github.com/phydev/spiccato

Software developed to study the influence of the extracellular matrix in cell migration.

cell-biology mathematical-modelling metastasis modeling phase-field

Last synced: 03 Jan 2026

https://github.com/phydev/prostproject

Modelling prostate cancer growth

Last synced: 27 Mar 2026

https://github.com/phydev/angio

Developing a 3D phase-field modelling for tumor angiogenesis

Last synced: 02 Jan 2026

https://github.com/phydev/cells3d

Last synced: 02 Jan 2026

https://github.com/phydev/cells

Simulating a multicellular system with a phase-field model

Last synced: 02 Jan 2026

https://github.com/phydev/laplace3d

3D laplace equation solver implemented with a 3D virtual topology in MPI

Last synced: 03 Jan 2026

https://github.com/phydev/metsim

Last synced: 03 Jan 2026

https://github.com/phydev/bd4qol

Code used in the BD4QoL project.

Last synced: 31 Jul 2025

https://github.com/phydev/actomyosin

Last synced: 19 Aug 2025

https://github.com/phydev/rcourse

R with Tidyverse material for advanced experimental design course

Last synced: 04 Aug 2025

https://github.com/phydev/data

Last synced: 03 Jan 2026

https://github.com/phydev/mice

Multiple imputation with chained equation implemented from scratch. This is a low performance implementation meant for pedagogical purposes only.

data-cleaning data-science imputation mice-algorithm missingness multiple-imputation

Last synced: 15 Mar 2025

https://github.com/phydev/systems-oncology

Finite Element method and finite differences implementations for Fokker-Planck equation

Last synced: 15 Mar 2025

https://github.com/phydev/tcga-supertreat

Download gene expression data from TCGA for a subset of patients selected in the SuPerTreat project.

Last synced: 15 Mar 2025

https://github.com/phydev/phy_utils

Personal library of codes developed for data analysis.

Last synced: 15 Mar 2025

https://github.com/phydev/sigma

Sigma is an API for validating and retrieving information from Norwegian ID numbers.

Last synced: 15 Mar 2025

https://github.com/phydev/supertreat_api

SuPerTreat prediction models API

Last synced: 15 Mar 2025

https://github.com/phydev/phybiojs

Introducing multi-phase-field models for biological systems in the browser with JavaScript and Plot.ly!

Last synced: 28 Jun 2025

https://github.com/phydev/pybot

Python Console in twitter.

Last synced: 28 Aug 2025

https://github.com/phydev/gists

fragment of codes to be executed on the cloud

Last synced: 06 Oct 2025

https://github.com/phydev/jupyter_notebooks

This is my personal collection of jupyter notebooks. I am sharing it in hope of being useful for someone else.

Last synced: 09 Oct 2025

https://github.com/phydev/phydev

Phydev's GitHub profile.

Last synced: 28 Jan 2026

https://github.com/phydev/fftw

Laplace Solver with Fast Fourier Transform in the West

Last synced: 27 Feb 2026

https://github.com/phydev/hmodel

An implementation for the Model H applied to multicellular systems

Last synced: 16 Feb 2026

https://github.com/phydev/celltas

CELLular migraTion mAchine Simulator

Last synced: 11 Feb 2026

https://github.com/phydev/pyblog

Serverless blog system powered by python and GitHub Actions.

Last synced: 17 Feb 2026

https://github.com/phydev/scripts

Collection of scripts for research related tasks

Last synced: 18 Jul 2025

https://github.com/phydev/phydev.github.io

phydev.github.io

Last synced: 02 Jan 2026