https://github.com/dockstore/dockstore-training

Working space for creating dockstore training materials

cwl docker nextflow wdl

Last synced: 23 Oct 2024

https://github.com/umccr/cwl-novice-tutorial

CWL Novice Tutorial

cwl

Last synced: 23 Oct 2024

https://github.com/fairagro/M4.4_UC6_ARC

UC6 workflow in ARC proof-of-concept

common-workflow-language cwl fairagro

Last synced: 23 Oct 2024

https://github.com/emulation-as-a-service/cwl-action

cwl

Last synced: 23 Oct 2024

https://github.com/beroukhim-lab/GATK_CN_CWL

Implementation of the GATK copy number pipeline in CWL (ported from WDL)

cnv cwl gatk gdc wdl

Last synced: 23 Oct 2024

https://github.com/systemPipeR/SPblast

BLAST Workflow Template

analysis-pipeline blast cwl development systempiper systempiper-workflows workflow

Last synced: 23 Oct 2024

https://github.com/COV-IRT/d3b-dev-rnaseq-snv

RNAseq SNV Calling Workflow (beta)

cwl rnaseq workflows

Last synced: 23 Oct 2024

https://github.com/fpsom/intro-to-cwl-docker

Introduction to CWL and Docker

cwl docker training

Last synced: 23 Oct 2024

https://github.com/stjudecloud/rfcs

Request for Comments (RFCs) on the St. Jude Cloud Project.

bioinformatics bioinformatics-pipeline computational-biology cwl cwl-workflow discussion genomics proposal rfcs stjudecloud wdl wdl-workflow workflow workflow-engine

Last synced: 21 Nov 2024

https://github.com/ktaletsk/cwl-examples

common-workflow-language commonwl cromwell cwl

Last synced: 31 Dec 2024

https://github.com/nanxstats/cwl-exploder

Shiny app to unpack monolithic CWL workflows

bioinformatics common-workflow-language cwl reticulate shiny-apps

Last synced: 16 Nov 2024