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Molecule

Molecule is designed to aid in the development and testing of Ansible roles.

Molecule provides support for testing with multiple instances, operating systems and distributions, virtualization providers, test frameworks, and testing scenarios.

Molecule encourages an approach that results in consistently developed roles that are well-written, easily understood and maintained.

https://github.com/jugatsu/ansible-role-molecule-linux-windows

Example ansible role for multiple OS with Windows support :blush:. Can be tested in molecule.

ansible ansible-roles molecule windows

Last synced: 13 Oct 2024

https://github.com/cloudalchemy/ansible-coredns

Ansible provisioning of CoreDNS

coredns molecule tox

Last synced: 09 Oct 2024

https://github.com/robertdebock/ansible-role-vault

Install Hashicorp Vault, either a package or a binary.

ansible hashicorp molecule playbook security tox vault

Last synced: 09 Oct 2024

https://github.com/megabyte-labs/gas-station

🎉 An Ansible playbook that provisions your network with software from GitHub Awesome lists, developed with disaster recovery in mind ⛽🔥🤤 🐴

ansible ansible-role archlinux centos debian doctor fedora install installdoc installdoctor macos mblabs megabytelabs molecule playbook professormanhattan role ubuntu washingtondc windows

Last synced: 10 Oct 2024

https://github.com/robertdebock/ansible-role-rundeck

Install and configure rundeck on your system.

ansible molecule playbook rundeck tox

Last synced: 09 Oct 2024

https://github.com/sgsaenger/vipster

Visualization and editing of periodic molecular structure files.

atom cpmd cpp17 emscripten gui lammps molecule pwscf python quantum-espresso visualization xyz

Last synced: 09 Oct 2024

https://github.com/augus1999/mol2chemfigpy3

The python 3 version of mol2chemfig package. 🛠️pip install mol2chemfigPy3

chemfig chemistry chemistry-molecule mol2chemfig molecule python3 tool

Last synced: 11 Oct 2024

https://github.com/xiaoruidong/rdmc

Reaction Data and Molecular Conformers (RDMC) is a package dealing with reactions, molecules, conformers, majorly in 3D.

conformer molecule rdkit reaction

Last synced: 09 Oct 2024

https://github.com/lukasturcani/vabene

Make valid molecular graphs!

chemistry molecule molecule-builder

Last synced: 11 Oct 2024

https://github.com/nl2go/ansible-role-hetzner_installimage

An Ansible Role that manages the OS image installation lifecycle of Hetzner servers using Hetzner Robot API.

ansible-role hetzner hetzner-robot-api molecule

Last synced: 14 Aug 2024

https://github.com/robertdebock/ansible-role-dsvpn

Install and configure DSVPN on your system.

ansible dsvpn molecule networking playbook tox

Last synced: 04 Aug 2024

https://github.com/superstar54/weas-widget

A widget to visualize and edit atomic structures in Jupyter Notebook

3d crystal editor jupyter-notebook molecule visualization

Last synced: 09 Oct 2024

https://github.com/evrardjp/ansible-tinc

Role to install tinc in a star/ring topology (w/ leaf/spine) (based on your variables)

ansible centos debian molecule openwrt tinc ubuntu vpn

Last synced: 13 Oct 2024

https://github.com/systemli/ansible-role-cryptpad

Ansible role to install & maintain cryptpad

ansible collaboration cryptpad debian molecule texteditor

Last synced: 04 Nov 2024

https://github.com/futianfan/CORE

CORE: Automatic Molecule Optimization using Copy & Refine Strategy (AAAI 2020)

drug-design drug-discovery molecule molecule-generation

Last synced: 08 Aug 2024

https://github.com/superstar54/blase

Python module for drawing and rendering ASE (Atomic Simulation Environment) atoms and molecules objects using blender.

ase atoms blender molecule python

Last synced: 23 Oct 2024

https://github.com/ferchault/apdft

APDFT calculates quantumchemical results for many molecules at once.

chemistry density-functional-theory molecule

Last synced: 09 Oct 2024

https://github.com/robertdebock/ansible-role-java

Install and configure java on your system.

alternatives ansible java jdk jre molecule openjdk oracle playbook system tox

Last synced: 13 Oct 2024

https://github.com/chao1224/sgnn-ebm

Structured Multi-task Learning for Molecular Property Prediction, AISTATS'22 (https://proceedings.mlr.press/v151/liu22e.html)

chembl chembl-string energy-based-model knowledge-graph molecule multitask-learning ppi-networks string

Last synced: 27 Oct 2024

https://github.com/robertdebock/ansible-role-sysctl

Configure sysctl on your system.

ansible molecule playbook sysctl system tox

Last synced: 01 Aug 2024

https://github.com/ansible-community/molecule-inspec

Molecule Inspec Verifier Plugin

ansible molecule molecule-plugin

Last synced: 26 Sep 2024

https://github.com/ansible-community/molecule-containers

❗️Migrated into molecule-plugins

ansible hacktoberfest molecule molecule-driver

Last synced: 26 Sep 2024

https://github.com/dkratzert/shelxfile

A parser and editor for SHELXL files.

atom crystallography editor molecule parser shelxl

Last synced: 27 Oct 2024

https://github.com/rhythmictech/ansible-role-molecule-demo

A Hello-World Ansible role to demonstrate the power of Molecule

ansible ansible-roles asciicast ec2 molecule molecule-demo rad vagrant

Last synced: 13 Oct 2024

https://github.com/andreygubarev/molecule-qemu

Molecule QEMU driver for testing Ansible roles

ansible molecule molecule-driver qemu virtualization

Last synced: 09 Oct 2024

https://github.com/samdoran/cookiecutter-ansible-role

Cookiecutter template for creating Ansible roles. Includes tests for TravisCI using Molecule.

ansible ansible-role molecule

Last synced: 01 Nov 2024

https://github.com/josiehong/3dmolms

[Bioinformatics] 3DMolMS: prediction of tandem mass spectra from 3D molecular conformations

mass-spectrometry molecule

Last synced: 09 Oct 2024

https://github.com/atosatto/ansible-prometheus

An Ansible role to install and configure Prometheus (https://prometheus.io)

ansible molecule monitoring prometheus

Last synced: 27 Oct 2024

https://github.com/zakodium-oss/react-ocl

React components integrating OpenChemLib

editor hacktoberfest molecule molfile reactjs smiles

Last synced: 09 Oct 2024

https://github.com/robertdebock/ansible-role-cve_2021_44228

Check and report for cve_2021_44228 (log4shell) on your system.

ansible cve202144228 log4j log4shell molecule playbook security tox

Last synced: 04 Aug 2024

https://github.com/justinmc/parse-pdb

A small utility for parsing PDB files into useable JSON

json molecular-data molecule pdb

Last synced: 09 Oct 2024

https://github.com/varungitgood/fend

A GUI based hardening tool which can remotely harden Ubuntu systems easily at the command of your fingertips with many security modules implemented.

ansible electron mantine molecule typescript

Last synced: 09 Oct 2024

https://github.com/retr0h/molecule-k3d

Molecule K3D Driver allows Molecule users to test Ansible code using K3D.

ansible k3d k8s kubernetes molecule molecule-driver testing

Last synced: 11 Oct 2024

https://github.com/4surix/atomion

Manipuler des concepts physiques/chimiques (atomes, ions, équations, ...) facilement.

atome equation ion molecule quark

Last synced: 09 Oct 2024

https://github.com/ansible-community/molecule-azure

🚧 Assimilated into molecule-plugins

ansible hacktoberfest molecule molecule-driver

Last synced: 26 Sep 2024

https://github.com/robertdebock/ansible-role-harbor

Install and configure harbor on your system.

ansible development harbor molecule playbook tox

Last synced: 04 Aug 2024

https://github.com/abelcarreras/symgroup

Continuous symmetry measures of molecular structures

chemistry csm molecule symmetry

Last synced: 25 Oct 2024

https://github.com/streamlit/streamlit-ketcher

Chemical molecule custom component for Streamlit apps

cheminformatics chemistry editor molecule

Last synced: 07 Oct 2024

https://github.com/dangnh0611/kaggle_leash_belka

11th place solution of NeurIPS 2024 - Predict New Medicines with BELKA competition on Kaggle: https://www.kaggle.com/competitions/leash-BELKA

belka binding bio chemistry drug-discovery fingerprint graph-neural-network kaggle leash masked-language-modeling molecule pretraining protein-ligand-interactions qsar self-supervised-learning smiles-strings

Last synced: 09 Oct 2024

https://github.com/fatimasajadi/chemozart

Web-based 3D molecule editor and visualizer with molecular mechanics calculators.

chemistry molecule

Last synced: 27 Oct 2024

https://github.com/rohanv01/molecule_format_converter

This jupyter notebook let's you convert sdf to pdb or SMILES to pdbqt file formats for a batch of compounds to perform cheminformatics and drug discovery projects

cheminformatics drug-design drug-discovery molecule problem-solving smiles

Last synced: 09 Oct 2024

https://github.com/ipqa-research/ugropy

A Python library designed to swiftly and effortlessly obtain the UNIFAC groups from molecules by their names and subsequently integrate them into inputs for thermodynamic libraries.

chemical chemical-engineering compound contribution engineering excess fragmentation functional gibbs group groups grupal joback molecule properties pure python thermodynamics unifac

Last synced: 09 Oct 2024

https://github.com/robertdebock/ansible-role-tailscale

Install and configure tailscale on your system.

ansible molecule network networking playbook security tailscale tox vpn

Last synced: 09 Oct 2024

https://github.com/retr0h/molecule-kind

Molecule Kind Driver allows Molecule users to test Ansible code using Kind.

ansible k8s kind kubernetes molecule molecule-driver testing

Last synced: 11 Oct 2024

https://github.com/thomasjewson/molecular3dlengthdescriptors

A 3D conformational based molecular descriptor set for use in QSPR and Machine Learning.

3d cheminformatics chemistry conformer crystallography descriptor learning machine molecule rdkit

Last synced: 09 Oct 2024

https://github.com/robertdebock/ansible-role-code

Install visual studio code on your system.

ansible code development molecule playbook tox

Last synced: 05 Nov 2024

https://github.com/robertdebock/ansible-role-cve_2024_3094

Check xz vulnerability (cve_2024_3094) on your system.

ansible cve20243094 linux molecule playbook security system tox

Last synced: 09 Oct 2024

https://github.com/josiehong/3dmolcsp

[Analytical Chemistry] Enhanced Structure-Based Prediction of Chiral Stationary Phases for Chromatographic Enantioseparation from 3D Molecular Conformations

analytical-chemistry chromatography molecule

Last synced: 09 Oct 2024

https://github.com/dkratzert/dsr

Refinement of disordered structures with SHELXL

crystallography database dsr fragments molecule python shelxl

Last synced: 27 Oct 2024

https://github.com/qkrdmsghk/goodhse

[CVPR 2024] Improving out-of-distribution generalization in graphs via hierarchical semantic environments

graph molecule ood-generalization

Last synced: 09 Oct 2024

https://github.com/chao1224/graphcg

Unsupervised Discovery of Steerable Factors When Graph Deep Generative Models Are Entangled, TMLR 2024

contrastive-learning controllable-generation editing function-group-editing graph lead-optimization molecular-graph molecule point-clouds shape-editing

Last synced: 01 Nov 2024

https://github.com/nomeyho/molecular-formula-parser

Molecular formula parser for Java

formula java molecular molecule parser

Last synced: 01 Nov 2024

https://github.com/jharley/ansible-example-base

This Ansible role is intended to represent an automation baseline for an organization or corporation.

ansible ansible-role molecule testinfra

Last synced: 26 Oct 2024

https://github.com/justinmc/tiny-molecule

A small, developer-friendly 3D molecule viewer for the modern web

3d mmcif molecule pdb visualizer

Last synced: 27 Oct 2024

https://github.com/thomasgust/molecumixer

Very incomplete right now, pretrained ARGVAET system for generating, classifying, and predicting the properties of molecules. I couldn't upload the dataset or checkpoints due to size constraints.

argvaet bioinformatics foundation-model generative-ai generative-pretraining gnn molecule neural-network pretraining pytorch rdkit

Last synced: 09 Oct 2024

https://github.com/matt-ramotar/paging

📄 A paging library for large-scale Kotlin apps. Powered by Store, Molecule, and Compose Runtime.

compose-runtime kotlin-multiplatform molecule paging store

Last synced: 09 Oct 2024

https://github.com/zjunlp/kano

[Nature Machine Intelligence 2023] Knowledge Graph-enhanced Molecular Contrastive Learning with Functional Prompt

contrastive-learning knowledge-graph knowledge-informed-prompt-learning molecule nature-machine-intelligence prompt prompt-learning

Last synced: 26 Sep 2024

https://github.com/gotmax23/ansible-role-github_cli

Ansible role that installs Github CLI (gh).

ansible ansible-role molecule role

Last synced: 27 Oct 2024

https://github.com/justin-p/ansible-role-gophish

A Ansible role that deploys the https://github.com/gophish/gophish/ application.

ansible ansible-role gophish hacktoberfest molecule phising

Last synced: 11 Oct 2024

https://github.com/superstar54/weas

WEAS is JavaScript library to visualize and manipulate the atomic structures directly in the web browser.

3d crystal isosurface manipulation molecule three-js visualization

Last synced: 09 Oct 2024

https://github.com/jharley/ansible-example-appserver

This Ansible role is intended to represent a trivial web application server

ansible ansible-role molecule testinfra

Last synced: 26 Oct 2024

https://github.com/js-ish/moltx

Molcule Transformer X Model

ai drug-discovery molecule transformer

Last synced: 09 Oct 2024

https://github.com/gotmax23/ansible-role-zoom

Ansible role that installs the Zoom client on Linux.

ansible ansible-role communication desktop linux molecule role video zoom

Last synced: 27 Oct 2024

https://github.com/monolithprojects/docker-systemd-centos8

Systemd enabled CentOS8 docker image with pre-created ansible user

ansible centos centos8 docker molecule systemd

Last synced: 13 Oct 2024

https://github.com/darkwizard242/docker-ansible

Ansible pre-installed docker images to support for molecule and other requirements.

ansible docker docker-ansible docker-container docker-images dockerfiles molecule

Last synced: 27 Oct 2024

https://github.com/flaudisio/ansible-role-molecule-ec2-manager

Ansible role for managing Molecule EC2 instances.

ansible ec2 molecule molecule-ec2

Last synced: 13 Oct 2024

https://github.com/redlinetriad/molecule-vagrant-qemu-action

GitHub Action for running molecule using Vagrant and QEMU as part of your workflows!

github-actions hacktoberfest molecule qemu testing vagrant

Last synced: 30 Sep 2024

https://github.com/jobcespedes/pg_cluster

Ansible role for a database cluster using Postgres (11), Pgpool2 (4.0) and Debian (10).

ansible ansible-role cluster database molecule pgpool2 postgres

Last synced: 11 Oct 2024

https://github.com/decentldotland/molecule-ext-1

An extension for MEM's molecule library

decentland mem molecule

Last synced: 01 Nov 2024

https://github.com/penguinowl/molecules

A game about molecules, mainly developed to demonstrate OOP at its finest.

game molecule ruby

Last synced: 26 Oct 2024

https://github.com/linhaowei1/molretrieval

This repo implements many methods to retrieve molecules that are similar to a target molecule from a large molecule corpus.

ai4science biology computational-biology language-models molecule rag retreival retrieval-augmented-generation

Last synced: 09 Oct 2024

https://github.com/robertdebock/ansible-role-bareos_dir

Install and configure [Bareos](https://www.bareos.com/) Director.

ansible bareos infrastructure linux molecule playbook storage system tools tox

Last synced: 01 Nov 2024

https://github.com/gotmax23/ansible-role-update

Ansible role that checks for and optionally installs system updates. It also has to the option to print upgradeable packages without actually upgrading them.

ansible ansible-role molecule role update upgrade

Last synced: 02 Nov 2024

https://github.com/hicai-zju/kano-mindspore

MindSpore implementation for paper "Knowledge graph-enhanced molecular contrastive learning with functional prompt"

graph-neural-networks knowledge-graph mindspore molecule pretrained-models

Last synced: 01 Nov 2024

https://github.com/tinaccil/fortranthermostats

Molecule thermostatistics properties code in Fortran90

chemoinformatics molecule thermodynamics

Last synced: 01 Nov 2024

https://github.com/osofem/molecules

Get atoms from a molucular formula

atom chemistry compounds elements formula molecule

Last synced: 11 Oct 2024

https://github.com/maxischuh/twinbooster

Package for TwinBooster. Enables fast and powerful zero-shot molecular property prediction.

cheminformatics chemistry large-language-models machine-learning molecular-property-prediction molecule

Last synced: 09 Oct 2024

https://github.com/nextlayer-ansible/molecule-lxd

Molecule LXD allows using LXD to provision containers or virtual-machines as test resources for molecule

ansible lxd molecule molecule-driver testing-tools

Last synced: 09 Oct 2024

https://github.com/gotmax23/ansible-role-pass

Ansible role that installs password-store (pass), the standard Unix password manager.

ansible ansible-role molecule pass password-store role

Last synced: 02 Nov 2024

https://github.com/ssbarnea/slides

Slides I created over time, open-source, PRs welcomed.

ansible-lint hugo-site molecule slides

Last synced: 23 Oct 2024