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awesome-PhD

All the resources I wish I knew when starting my PhD. This repository is aimed to be a living, constantly developing resource where everybody can contribute with new resources!
https://github.com/helenahartmann/awesome-PhD

Last synced: 3 days ago
JSON representation

List of resources
- Visualization
  - MAKE YOUR OWN SCATTERPLOT
  - AUTODRAW
  - BIOICONS
  - BRAIN CODE SELECTOR
  - CANVA
  - COLOR ORACLE
  - COLOR PICKER
  - FLATICON
  - FONT AWESOME
  - FSBRAIN - based brain structure data for large groups of subjects with very little code" and "also supports the computation of simple brain morphometry measures".
  - GGHELP
  - GGPLOT TRICKS
  - MIRO
  - R VISUALIZATION
  - R GRAPH GALLERY
  - PHYLOPIC
- Analysis
  - DATAPASTA
  - METAFOR - analyses.
  - STATCHECK
  - WEB PLOT DIGITIZER
- Inclusion
  - COLS4ALL
  - EQUITY COMPASS
- Literature
  - SNOWBALL
  - CODA - readable history of cooperation research, to search, select and visualize studies for on-demand meta-analysis.
  - CONNECTED PAPERS
  - CONSENSUS
  - COVIDENCE
  - LITERATURE EXCEL SHEET
  - LITERATURE TRACKER
  - RESEARCH RABBIT
  - SCHOLARCY
  - SEABOAT
  - SEMANTIC SCHOLAR - powered research tool to find scientific literature.
  - SCITE
- Meta-analyses
  - METALAB - augmented meta-analysis tools for cognitive development research.
  - 10 EASY STEPS - analyses for infant researchers".
  - TEMPLATES - analysis in the age of open science: Tools, tips, and practical recommendations", including nine templates free for use, from preregistration to code to data.
- Miscellaneous
  - OPEN SCIENCE ESCAPE ROOM
  - COLOR CONVERTER
  - DATA HORROR ESCAPE ROOM
  - SEMANTIC SCALE NETWORK
- Networking
  - ACADEMICS ON MASTODON
  - TWITTER FOR SCIENTISTS
- Neuroscience
  - EDUCORTEX - based visualization tool allows you to enter any functional or anatomical term and visualize the parts of the brain that are most associated with that term. Check the [GitHub repository](https://github.com/PaulScotti/educortex) or corresponding [paper](https://jose.theoj.org/papers/10.21105/jose.00075).
  - 3D BRAIN - printer? Follow this easy tutorial to print your own brain.
  - DICOMTAGS
  - FMRI COURSE
  - NEUROQUERY - analysis of neuroimaging studies, relating text queries to activations as well as associations between terms used together in neuroimaging publications. More info in the corresponding [paper](https://elifesciences.org/articles/53385).
  - NEUROSYNTH - scale, automated synthesis of functional magnetic resonance imaging (fMRI) data. You can search for word associations and papers with specific MNI coordinates.
- Organization
  - BRAINVERSE - source, cross-platform tool for notetaking, experiment planning and a labbook tool.
  - TRELLO
  - The Good Research Code Handbook
- Career
  - JOB INTERVIEW - track job talks.
  - PHD COMPETENCE MODEL - assessment tool to help PhD candidates more efficiently direct their time towards improving skills areas that are most needed for their own personal career development."
  - POSTDOC FUNDING
  - TALK INVITATIONS
- Crediting
  - CITATION DIVERSITY STATEMENT
  - CITATION GECKO
  - CREDIT AUTHOR STATEMENT
  - TENZING
- Data
  - 24 DAYS OF DATABASES
  - POPANE DATASET - reported affect along with several biosignals (electrocardiogram, impedance cardiogram, electrodermal activity, hemodynamic measures, e.g., blood pressure), respiration trace, and skin temperature. [The authors] experimentally elicited a wide range of positive and negative emotions, including amusement, anger, disgust, excitement, fear, gratitude, sadness, tenderness, and threat".
- Design
  - SAMPLE SIZE JUSTIFICATION
- Events
  - OPEN RESEARCH CALENDAR
  - REPRODUCIBILITEA
  - RIOT SCIENCE CLUB
- Infographics and Cheatsheets
  - CHOOSE YOUR PLOT
  - DOWNLOAD SCIENTIFIC PAPERS
  - ETYMOLOGY OF THE BRAIN
  - fNIRS CHEATSHEET
  - GITHUB CHEATSHEET
  - JUPYTER NOTEBOOK CHEATSHEET
- Online Presence
  - WOWCHEMY WEBSITE
- Podcasts
  - ACROSS THE AGES
  - BRAINFLICKS
  - DEAR GRAD STUDENT
  - EVERYTHING HERTZ
  - HONEST ACADEMIA
  - PLANTHROPOLOGY
  - SCIENCE SHEROES - binary people in science.
- Publication
  - 10 WAYS TO FIND OPEN ACCESS ARTICLES
  - EDITOR
  - JOURNAL-AUTHOR-NAME-ESTIMATOR
  - JOURNAL RATER
  - JOURNAL SUGGESTER
  - ORCID - an "Open Researcher and Contributor ID" which is a persistent digital identifier that you own and control, and that distinguishes you from every other researcher. Link your projects and output to your ORCID.
  - SCIREV
  - SHERPA ROMEO
  - UNPAYWALL
- References
  - BIBTEX
  - CITING R PACKAGES - cookbook/write-bib.html).
  - RECITEWORKS - text citations and reference lists for errors, use Reciteworks.
  - REFERENCE MANAGEMENT COMPARISON
- Reproducibility
  - NEUROIMAGING - based workshop on how to conduct reproducible neuroimaging.
  - PREREGISTRATION TEMPLATES
  - WORKFLOW - hour workshop.
- Stimuli
  - EMBODY/EMFACE
  - EMPATHY FOR PAIN
  - FULL BODY STIMULI - body stimuli in your experiments? Look no further.
  - KAPODI STIMULI DATABASE
- Version control
  - DIFFCHECKER
- Writing
  - ACRONYMIFY
  - APA-STYLE WORD DOCUMENT - style word document option, where you can directly initialize the right formatting in Word.
  - LEADERSHIP LAB
  - LIST OF ACRONYMS MAKER
  - PAPAJA
  - PREPRINT TEMPLATES
  - QUILLBOT
  - THE CRAFT OF WRITING EFFECTIVELY
Other (awesome) resources on this topic
- awesome-phd
- PhD Resources
- awesome-phd-advice
- IGOR - a scientific resource collection to navigate the resource jungle.
- Doctoral Student Cheat Sheet
- Resources for Postdocs
Special thanks for contributions to this list
- Writing
  - Lei Zhang
  - #AcademicTwitter

Programming Languages

HTML 4 R 2 JavaScript 1 Vue 1

Ecosyste.ms: Awesome

awesome-PhD

List of resources

Visualization

Analysis

Inclusion

Literature

Meta-analyses

Miscellaneous

Networking

Neuroscience

Organization

Career

Crediting

Data

Design

Events

Infographics and Cheatsheets

Online Presence

Podcasts

Publication

References

Reproducibility

Stimuli

Version control

Writing

Other (awesome) resources on this topic

Special thanks for contributions to this list

Writing