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awesome-healthmetrics

A curated list of awesome resources at the intersection of healthcare and AI
https://github.com/leandromineti/awesome-healthmetrics

Last synced: 5 days ago
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General
Epidemiology & infectology
Genetics
Neurology
- Articles
  - Near real-time intraoperative brain tumor diagnosis using stimulated Raman histology and deep neural networks - Nature Medicine - 2020
  - High-precision automated reconstruction of neurons with flood-filling networks - 2018
  - Near real-time intraoperative brain tumor diagnosis using stimulated Raman histology and deep neural networks - Nature Medicine - 2020
  - High-precision automated reconstruction of neurons with flood-filling networks - 2018
  - Near real-time intraoperative brain tumor diagnosis using stimulated Raman histology and deep neural networks - Nature Medicine - 2020
  - A Deep Learning Model to Predict a Diagnosis of Alzheimer Disease by Using 18F-FDG PET of the Brain - 2018
  - High-precision automated reconstruction of neurons with flood-filling networks - 2018
  - Machine learning in neurology: what neurologists can learn from machines and vice versa - 2018
  - AI and Neuroscience: A virtuous circle
  - Artificial Intelligence and Neurology - 2016
  - Near real-time intraoperative brain tumor diagnosis using stimulated Raman histology and deep neural networks - Nature Medicine - 2020
  - High-precision automated reconstruction of neurons with flood-filling networks - 2018
  - Near real-time intraoperative brain tumor diagnosis using stimulated Raman histology and deep neural networks - Nature Medicine - 2020
  - High-precision automated reconstruction of neurons with flood-filling networks - 2018
  - Near real-time intraoperative brain tumor diagnosis using stimulated Raman histology and deep neural networks - Nature Medicine - 2020
  - High-precision automated reconstruction of neurons with flood-filling networks - 2018
  - Near real-time intraoperative brain tumor diagnosis using stimulated Raman histology and deep neural networks - Nature Medicine - 2020
  - High-precision automated reconstruction of neurons with flood-filling networks - 2018
  - Near real-time intraoperative brain tumor diagnosis using stimulated Raman histology and deep neural networks - Nature Medicine - 2020
  - High-precision automated reconstruction of neurons with flood-filling networks - 2018
  - Near real-time intraoperative brain tumor diagnosis using stimulated Raman histology and deep neural networks - Nature Medicine - 2020
  - High-precision automated reconstruction of neurons with flood-filling networks - 2018
  - Near real-time intraoperative brain tumor diagnosis using stimulated Raman histology and deep neural networks - Nature Medicine - 2020
  - High-precision automated reconstruction of neurons with flood-filling networks - 2018
  - Near real-time intraoperative brain tumor diagnosis using stimulated Raman histology and deep neural networks - Nature Medicine - 2020
  - High-precision automated reconstruction of neurons with flood-filling networks - 2018
  - Near real-time intraoperative brain tumor diagnosis using stimulated Raman histology and deep neural networks - Nature Medicine - 2020
  - High-precision automated reconstruction of neurons with flood-filling networks - 2018
  - Near real-time intraoperative brain tumor diagnosis using stimulated Raman histology and deep neural networks - Nature Medicine - 2020
  - High-precision automated reconstruction of neurons with flood-filling networks - 2018
  - Near real-time intraoperative brain tumor diagnosis using stimulated Raman histology and deep neural networks - Nature Medicine - 2020
  - High-precision automated reconstruction of neurons with flood-filling networks - 2018
  - Near real-time intraoperative brain tumor diagnosis using stimulated Raman histology and deep neural networks - Nature Medicine - 2020
  - High-precision automated reconstruction of neurons with flood-filling networks - 2018
  - Near real-time intraoperative brain tumor diagnosis using stimulated Raman histology and deep neural networks - Nature Medicine - 2020
  - High-precision automated reconstruction of neurons with flood-filling networks - 2018
  - Near real-time intraoperative brain tumor diagnosis using stimulated Raman histology and deep neural networks - Nature Medicine - 2020
  - High-precision automated reconstruction of neurons with flood-filling networks - 2018
  - Near real-time intraoperative brain tumor diagnosis using stimulated Raman histology and deep neural networks - Nature Medicine - 2020
  - High-precision automated reconstruction of neurons with flood-filling networks - 2018
  - Near real-time intraoperative brain tumor diagnosis using stimulated Raman histology and deep neural networks - Nature Medicine - 2020
  - High-precision automated reconstruction of neurons with flood-filling networks - 2018
- Books
- Datasets
- Competitions
  - PREPARE: Pioneering Research for Early Prediction of Alzheimer's and Related Dementias EUREKA Challenge - DrivenData - 2023.
  - Ultrasound Nerve Segmentation: identify nerve structures in ultrasound images of the neck - Kaggle - 2016
  - Melbourne University AES/MathWorks/NIH Seizure Prediction: predict seizures in long-term human intracranial EEG recordings - Kaggle - 2016
  - Grasp-and-Lift EEG Detection: identify hand motions from EEG recordings - Kaggle - 2015
  - CONNECTOMICS: reconstruct the wiring between neurons from fluorescence imaging of neural activity - Kaggle - 2014
  - DecMeg2014 - Decoding the Human Brain: predict visual stimuli from MEG recordings of human brain activity - Kaggle - 2014
  - UPenn and Mayo Clinic's Seizure Detection Challenge: detect seizures in intracranial EEG recordings - Kaggle - 2014
  - American Epilepsy Society Seizure Prediction Challenge: predict seizures in intracranial EEG recordings - Kaggle - 2014
  - Predicting Parkinson's Disease Progression with Smartphone Data - Kaggle - 2013
- Conferences and events
  - International Conference on Brain Informatics
Oncology
- Articles
  - Improved Grading of Prostate Cancer Using Deep Learning - 2018
  - Robust breast cancer detection in mammography and digital breast tomosynthesis using annotation-efficient deep learning approach - 2019
- Competitions
  - Histopathologic Cancer Detection: identify metastatic tissue in histopathologic scans of lymph node sections - Kaggle - 2019
  - Data Science Bowl 2017: Can you improve lung cancer detection? - Kaggle - 2017
  - Intel & MobileODT Cervical Cancer Screening: which cancer treatment will be most effective? - Kaggle - 2017
  - Personalized Medicine: redefining cancer treatment - Kaggle - 2017
Ophthalmology
- Articles
  - Deep Learning for Detection of Diabetic Eye Disease - Google - 2016.
- Competitions
  - Diabetic Retinopathy Detection: identify signs of diabetic retinopathy in eye images - Kaggle - 2015
Cardiology
- Datasets
- Packages
  - cardIO: data science research of heart signals in Python
- Articles
- Books
  - ECG Signal Processing, Classification and Interpretation: A Comprehensive Framework of Computational Intelligence
- Competitions
  - Machine Learning with a Heart: predicting heart disease - DrivenData - open
  - II Annual Data Science Bowl: transforming how we diagnose heart disease - Kaggle - 2016
Orthopedicts
- Datasets
  - Vertebral Column Data Set
- Competitions
  - MURA: Bone X-Ray Deep Learning Competition - Stanford ML Group - open
Pharmacology
- Articles
  - Network Medicine Framework for Identifying Drug Repurposing Opportunities for COVID-19 - 2020
  - Meta-Learning Initializations for Low-Resource Drug Discovery - 2020
- Competitions
  - Merck Molecular Activity Challenge: help develop safe and effective medicines by predicting molecular activity - Kaggle - 2012
  - Predicting a Biological Response: predict a biological response of molecules from their chemical properties - Kaggle - 2012
Psychiatry
- Articles
  - Feeling Anxious? Perceiving Anxiety in Tweets using Machine Learning - 2019
  - A novel machine learning based framework for detection of Autism Spectrum Disorder (ASD) - 2019
- Books
  - Computational Neurology and Psychiatry
- Competitions
  - MLSP 2014 Schizophrenia Classification Challenge: diagnose schizophrenia using multimodal features from MRI scans - Kaggle - 2014
  - Psychopathy Prediction Based on Twitter Usage - Kaggle - 2012
Pulmonology
- Competitions
  - RSNA Pneumonia Detection Challenge: can you build an algorithm that automatically detects potential pneumonia cases? - Kaggle - 2018
Research
- Competitions
  - Human Protein Atlas Image Classification: classify subcellular protein patterns in human cells - Kaggle - 2019
  - 2018 Data Science Bowl: find the nuclei in divergent images to advance medical discovery - Kaggle - 2018

Programming Languages

Python 4 Jupyter Notebook 2 R 1

Categories

Genetics 67 General 64 Neurology 61 Epidemiology & infectology 48 Cardiology 14 Oncology 6 Psychiatry 5 Pharmacology 4 Orthopedicts 2 Research 2 Ophthalmology 2 Pulmonology 1

Sub Categories

Articles 199 Competitions 32 Datasets 18 Books 11 Packages 9 Conferences and events 6 Courses 1

Keywords

machine-learning 3 python 3 healthcare 2 bioinformatics 2 genomics 2 medical 2 biopython 1 deep-neural-networks 1 deep-learning 1 data-science 1 simpleitk 1 nifti-format 1 mhd 1 mha 1 medpy 1 magnetic-resonance-imaging 1 itk 1 image-segmentation 1 image-processing 1 image-classification 1 graph-cut 1 feature-extraction 1 dicom 1 computed-tomography 1 4d 1 3d 1 2d 1 list 1 health 1 awesome-list 1 awesome 1 vcf 1 snps 1 proteomics 1 medicine 1 gtf 1 genomes 1 genome-sequencing 1 genome-browser 1 genome-annotation 1 genome 1 ensembl 1 csv-parser 1 cancer-genomics 1 cancer-genomes 1 cancer 1 biology 1 bed 1 sequence-alignment 1 protein-structure 1