https://github.com/loli/medpy

Medical image processing in Python
https://github.com/loli/medpy

2d 3d 4d computed-tomography dicom feature-extraction graph-cut image-classification image-processing image-segmentation itk machine-learning magnetic-resonance-imaging medical medpy mha mhd nifti-format python simpleitk

Last synced: 30 days ago
JSON representation

Medical image processing in Python

• Host: GitHub
• URL: https://github.com/loli/medpy
• Owner: loli
• License: gpl-3.0
• Created: 2012-05-11T10:57:34.000Z (over 12 years ago)
• Default Branch: master
• Last Pushed: 2024-09-03T23:00:22.000Z (3 months ago)
• Last Synced: 2024-11-06T05:44:26.741Z (about 1 month ago)
• Topics: 2d, 3d, 4d, computed-tomography, dicom, feature-extraction, graph-cut, image-classification, image-processing, image-segmentation, itk, machine-learning, magnetic-resonance-imaging, medical, medpy, mha, mhd, nifti-format, python, simpleitk
• Language: Jupyter Notebook
• Homepage: http://loli.github.io/medpy/
• Size: 12.5 MB
• Stars: 577
• Watchers: 21
• Forks: 138
• Open Issues: 1
• Metadata Files:
  • Readme: README.md
  • Changelog: CHANGES.txt
  • License: LICENSE.txt

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README

        
[![PyPI version](https://badge.fury.io/py/MedPy.svg)](https://pypi.python.org/pypi/MedPy/)

[![anaconda version](https://anaconda.org/conda-forge/medpy/badges/version.svg)](https://anaconda.org/conda-forge/medpy)

[![PyPI pyversions](https://img.shields.io/pypi/pyversions/MedPy.svg)](https://pypi.python.org/pypi/MedPy/)

[![License: GPL v3](https://img.shields.io/badge/License-GPL%20v3-blue.svg)](https://www.gnu.org/licenses/gpl-3.0)

[![Downloads](https://pepy.tech/badge/medpy/month)](https://pepy.tech/project/medpy)

[![DOI](https://zenodo.org/badge/DOI/10.5281/zenodo.2565940.svg)](https://doi.org/10.5281/zenodo.2565940)

[GitHub](https://github.com/loli/medpy/) | [Documentation](http://loli.github.io/medpy/) | [Tutorials](http://loli.github.io/medpy/) | [Issue tracker](https://github.com/loli/medpy/issues)

# medpy - Medical Image Processing in Python

MedPy is an image processing library and collection of scripts targeted towards medical (i.e. high dimensional) image processing.

## Stable releases

- Download (stable release): https://pypi.python.org/pypi/medpy

- HTML documentation and installation instruction (stable release): http://loli.github.io/medpy/

- Download from [Conda-Forge](https://conda-forge.org): https://anaconda.org/conda-forge/medpy

## Development version

- Download (development version): https://github.com/loli/medpy

- HTML documentation and installation instruction (development version): create this from doc/ folder following instructions in contained README file

## Contribute

- Clone `master` branch from [github](https://github.com/loli/medpy)

- Install [pre-commit](https://pre-commit.com/) hooks or with `[dev,test]` extras

- Submit your change as a PR request

## Python 2 version

Python 2 is no longer supported. But you can still use the older releases `<=0.3.0`.

## Other links

- Issue tracker: https://github.com/loli/medpy/issues