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awesome-bio-datasets
awesome-bio-datasets
https://github.com/OpenGene/awesome-bio-datasets
Last synced: 3 days ago
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Model organism databases (selected examples)
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Others
- 1000 Genomes
- American Gut (Microbiome Project)
- Cell Image Library
- EBI ArrayExpress
- ENCODE project
- Ensembl Genomes
- Gene Ontology (GO)
- Genotype-Tissue Expression (GTEx)
- Global Biotic Interactions (GloBI)
- Harvard Medical School (HMS) LINCS Project
- Human Genome Diversity Project
- Human Microbiome Project (HMP)
- ICOS PSP Benchmark
- International HapMap Project
- Journal of Cell Biology DataViewer
- MIT Cancer Genomics Data
- NCBI Proteins
- NeuroData
- NIH Microarray data
- OpenSNP genotypes data
- Psychiatric Genomics Consortium
- PubChem Project
- PubGene (now Coremine Medical)
- Sanger Catalogue of Somatic Mutations in Cancer (COSMIC)
- Sequence Read Archive(SRA)
- Stanford Microarray Data
- Stowers Institute Original Data Repository
- Systems Science of Biological Dynamics (SSBD) Database
- Temple University Hospital EEG Database
- The Cancer Genome Atlas (TCGA), available via Broad GDAC
- The Exome Aggregation Consortium (ExAC)
- The Personal Genome Project - hms.org/public_genetic_data)
- UCSC Public Data
- Universal Protein Resource (UnitProt)
- UniGene
- Pathguid - Protein-Protein Interactions Catalog
- Broad Cancer Cell Line Encyclopedia (CCLE)
- Complete Genomics Public Data
- EBI Protein Data Bank in Europe
- The Catalogue of Life
- Psychiatric Genomics Consortium
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