https://github.com/yuifu/millefy

Millefy: Genome browser-like visualization of single-cell RNA-seq dataset
https://github.com/yuifu/millefy

genome-browser visualization

Last synced: 18 days ago
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Millefy: Genome browser-like visualization of single-cell RNA-seq dataset

• Host: GitHub
• URL: https://github.com/yuifu/millefy
• Owner: yuifu
• License: other
• Created: 2017-10-10T11:42:43.000Z (over 6 years ago)
• Default Branch: master
• Last Pushed: 2019-12-23T09:38:29.000Z (over 4 years ago)
• Last Synced: 2024-02-29T21:34:41.875Z (4 months ago)
• Topics: genome-browser, visualization
• Language: R
• Size: 113 MB
• Stars: 24
• Watchers: 3
• Forks: 2
• Open Issues: 4
• Metadata Files:
  • Readme: README.md
  • License: LICENSE

Lists

• awesome-single-cell - Millefy - [R] - An R package and a Docker image with JupyterLab for visualizing read coverage of scRNA-seq datasets in genomic contexts. By dynamically and automatically reorder single cells based on 'locus-specific' pseudotime, Millefy highlights cell-to-cell heterogeneity in read coverage of scRNA-seq data. [paper](https://doi.org/10.1186/s12864-020-6542-z). (Web portals, apps, and databases / Interactive visualization and analysis)
• repo-5916-awesome-genome-visualization - Millefy - genome-visualization/millefy.png) (Single cell)
• awesome-genome-visualization - Millefy