https://github.com/allencellmodeling/jupyter_notebook_conda_server

Scripts to set up a Jupiter notebook server that allows you to access your other Conda environments as Jupyter notebook kernels
https://github.com/allencellmodeling/jupyter_notebook_conda_server

Last synced: 10 months ago
JSON representation

Scripts to set up a Jupiter notebook server that allows you to access your other Conda environments as Jupyter notebook kernels

• Host: GitHub
• URL: https://github.com/allencellmodeling/jupyter_notebook_conda_server
• Owner: AllenCellModeling
• License: other
• Created: 2019-11-21T17:24:44.000Z (about 6 years ago)
• Default Branch: master
• Last Pushed: 2020-04-30T15:48:01.000Z (over 5 years ago)
• Last Synced: 2025-01-02T23:14:21.827Z (12 months ago)
• Language: Python
• Size: 176 KB
• Stars: 0
• Watchers: 4
• Forks: 1
• Open Issues: 0
• Metadata Files:
  • Readme: README.md
  • License: LICENSE

Awesome Lists containing this project

README

          
# jupyter notebook conda server

Sets up a Jupiter notebook server that allows you to access your other Conda environments as Jupyter notebook kernels

## Installation

```

git clone git@github.com:AllenCellModeling/jupyter_notebook_conda_server.git

cd jupyter_notebook_server

conda env create -f environment.yml

```

Note: The other Conda environments should have the `ipykernel` Conda package installed.

## Running the Jupter notebook server

```

cd ./jupyter_notebook_server

conda activate jupyter_notebook_conda_server

jupyter lab --notebook-dir='/allen/aics/modeling/'$USER

```

(Additional configurations can be set in `jupyter_notebook_config.py`)

On the top menu bar, you should be able to see other conda envs by going to 

`Kernel > Change Kernel...`

and you will get a pop-up that looks like this (for example):  

![alt text](./kernel_examples.png "Examples of kernels to select from")