https://github.com/alleninstitute/all-active-manuscript

Code for reproducing the figures presented in: Single-neuron models linking electrophysiology, morphology and transcriptomics across cortical cell types
https://github.com/alleninstitute/all-active-manuscript

Last synced: about 1 year ago
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Code for reproducing the figures presented in: Single-neuron models linking electrophysiology, morphology and transcriptomics across cortical cell types

• Host: GitHub
• URL: https://github.com/alleninstitute/all-active-manuscript
• Owner: AllenInstitute
• License: other
• Created: 2019-12-23T19:50:50.000Z (over 6 years ago)
• Default Branch: master
• Last Pushed: 2023-07-06T22:06:42.000Z (almost 3 years ago)
• Last Synced: 2025-04-11T20:11:27.296Z (about 1 year ago)
• Language: Jupyter Notebook
• Homepage:
• Size: 50.5 MB
• Stars: 9
• Watchers: 3
• Forks: 2
• Open Issues: 2
• Metadata Files:
  • Readme: README.md
  • License: LICENSE.txt

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README

          
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# All-active-Manuscript

Codes for generating figures presented in the All-active manuscript.

![alt text](assets/graphical_abstract/graphical_abstract.png)

## Instructions

To run the notebooks set up a conda environment using the following commands:

```bash

git clone https://github.com/AllenInstitute/All-active-Manuscript.git

cd All-active-Manuscript

conda env create -f env.yaml

conda activate allen

```

## Level of support

We are planning on occasional updating this tool with no fixed schedule. Community involvement is encouraged through both issues and pull requests.