https://github.com/applicativesystem/short-long-read-alignment-codegetter
codegetter for illumina, pacbio and oxford long read and short reads
https://github.com/applicativesystem/short-long-read-alignment-codegetter
bioinformatics genome-analysis illumina illumina-sequencing pacbio-hifi-sequencing-reads pacbio-sequencing shell shellscript
Last synced: about 2 months ago
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codegetter for illumina, pacbio and oxford long read and short reads
- Host: GitHub
- URL: https://github.com/applicativesystem/short-long-read-alignment-codegetter
- Owner: applicativesystem
- Created: 2024-08-20T18:55:25.000Z (10 months ago)
- Default Branch: main
- Last Pushed: 2024-08-20T20:08:59.000Z (10 months ago)
- Last Synced: 2024-11-10T20:18:18.212Z (8 months ago)
- Topics: bioinformatics, genome-analysis, illumina, illumina-sequencing, pacbio-hifi-sequencing-reads, pacbio-sequencing, shell, shellscript
- Language: Shell
- Homepage:
- Size: 1000 Bytes
- Stars: 0
- Watchers: 1
- Forks: 0
- Open Issues: 0
-
Metadata Files:
- Readme: README.md
Awesome Lists containing this project
README
# alignments-code-generator
- a shell code getter for genomics alignments for the illumina and long reads from pacbio and the oxford nanopore.
- bringing all the alignments tools for the illumina, pacbio and oxford nanopre under one hood.
- to get the code save the file and run as
```
sh illumina_pacbio_oxfordnanopore_code_getter.sh
```
Gaurav Sablok \
University of Potsdam \
Potsdam,Germany