https://github.com/aqlaboratory/hsm-web
Website associated with the "Biophysical prediction of protein-peptide interactions and signaling networks using machine learning."
https://github.com/aqlaboratory/hsm-web
Last synced: 2 months ago
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Website associated with the "Biophysical prediction of protein-peptide interactions and signaling networks using machine learning."
- Host: GitHub
- URL: https://github.com/aqlaboratory/hsm-web
- Owner: aqlaboratory
- License: mit
- Created: 2019-10-24T22:55:43.000Z (over 5 years ago)
- Default Branch: master
- Last Pushed: 2020-01-08T19:11:03.000Z (over 5 years ago)
- Last Synced: 2025-01-08T07:26:09.810Z (4 months ago)
- Language: HTML
- Homepage: https://proteinpeptide.io
- Size: 553 KB
- Stars: 7
- Watchers: 4
- Forks: 3
- Open Issues: 0
-
Metadata Files:
- Readme: README.md
- License: LICENSE
Awesome Lists containing this project
README
# hsm-web - Biophysical prediction of protein-peptide interactions and signaling networks using machine learning.
This repository contains the code associated with the website for [Biophysical prediction of protein-peptide interactions and signaling networks using machine learning.](https://doi.org/10.1038/s41592-019-0687-1). The website is located at [proteinpeptide.io](https://proteinpeptide.io). The website depends on downloading pre-processed data from [figshare]() and placing the directories into `assets`.
## Reference
Please reference the associated publication:
Cunningham, J.M., Koytiger, G., Sorger, P.K., & AlQuraishi, M. "Biophysical prediction of protein-peptide interactions and signaling networks using machine learning." *Nature Methods* (2020). [doi:10.1038/s41592-019-0687-1](https://doi.org/10.1038/s41592-019-0687-1).
### See also
- Paper code:[aqlaboratory/hsm](https://github.com/aqlaboratory/hsm)
## Credits
- Protein Viewer: [3Dmol.js](http://3dmol.csb.pitt.edu/)
- Network Viewer: [D3.js](https://d3js.org/)
- Styling / Layout: [Bootstrap stack](https://getbootstrap.com/)
## Funding
This work was supported by the following sources:
| **Funder** | **Grant number** |
| ---------- | ---------------- |
| NIH | U54-CA225088 |
| NIH | P50-GM107618 |
| DARPA / DOD | W911NF-14-1-0397 |
## License
This repository is released under an [MIT License](LICENSE)