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https://github.com/arnoudbuzing/wolfram-coronavirus
Wolfram Language code and notebooks related to the coronavirus outbreak
https://github.com/arnoudbuzing/wolfram-coronavirus
2019-ncov coronavirus coronavirus-tracking covid-19 data-science mathematica ncov-2019 wolfram-language wuhan wuhan-coronavirus-outbreak
Last synced: about 2 months ago
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Wolfram Language code and notebooks related to the coronavirus outbreak
- Host: GitHub
- URL: https://github.com/arnoudbuzing/wolfram-coronavirus
- Owner: arnoudbuzing
- License: mit
- Created: 2020-01-31T17:22:25.000Z (almost 5 years ago)
- Default Branch: master
- Last Pushed: 2021-08-15T03:37:50.000Z (over 3 years ago)
- Last Synced: 2023-04-20T14:32:01.949Z (almost 2 years ago)
- Topics: 2019-ncov, coronavirus, coronavirus-tracking, covid-19, data-science, mathematica, ncov-2019, wolfram-language, wuhan, wuhan-coronavirus-outbreak
- Language: Mathematica
- Size: 121 MB
- Stars: 34
- Watchers: 4
- Forks: 5
- Open Issues: 1
-
Metadata Files:
- Readme: README.md
- License: LICENSE
Awesome Lists containing this project
README
# Coronavirus
## Wolfram Language code and notebooks related to the coronavirus outbreak
[](https://wolfr.am/JZNRriEE)
#### Sources
Dashboard:
* [Dashboard with data](https://arnoudbuzing.github.io/wolfram-coronavirus/)
Twitch live streams:
* [Recording of my live Twitch session](https://www.twitch.tv/videos/547321229)
* [Coronavirus Data Exploration - Wolfram Livecoding with Students](https://www.twitch.tv/videos/548254391)
Wolfram Data Repository (datasets):
* [Top level search](https://datarepository.wolframcloud.com/search/?i=coronavirus)
* [Genetic Sequences for Novel Coronavirus 2019-nCoV from Wuhan, China](https://datarepository.wolframcloud.com/resources/Genetic-Sequences-for-Novel-Coronavirus-2019-nCoV-from-Wuhan-China)
* [Epidemic Data for Novel Coronavirus 2019-nCoV from Wuhan, China](https://datarepository.wolframcloud.com/resources/Epidemic-Data-for-Novel-Coronavirus-2019-nCoV-from-Wuhan-China)
* [Patient Medical Data for Novel Coronavirus 2019-nCoV from Wuhan, China](https://datarepository.wolframcloud.com/resources/Patient-Medical-Data-for-Novel-Coronavirus-2019-nCoV-from-Wuhan-China)
Posts on the Wolfram Community:
* [UPDATES -- Resources For Novel Coronavirus 2019-nCoV Wuhan China](https://community.wolfram.com/groups/-/m/t/1872608)
* [Genome analysis and the 2019-nCov](https://community.wolfram.com/groups/-/m/t/1874816)
* [Visualizing Sequence Alignments from the 2019-nCov](https://community.wolfram.com/groups/-/m/t/1875352)
* [Mapping Wuhan coronavirus outbreak (2019-nCoV)](https://community.wolfram.com/groups/-/m/t/1868945)
### Index to notebooks
| file | description |
| --- | --- |
| Electron-microscope-image.nb | imports an image of a cell surrounded by multiple coronoviruses |
| ExternalIdentifier-Coronavirus.nb | exploration of WikiData topics related to coronavirus |
| GeoBubbleChart-Analysis.nb | analysis of virus spread in China itself |
| Mapping_Wuhan_Coronavirus_in_China.nb | notebook from Joffre's community post |
| Patient-Medical-Data-Analysis.nb | analysis on patient medical data |
| ResourceData-Objects.nb | utility notebook to get the latest resource data object related to coronavirus |
| TimeSeries-Analysis.nb | time series analysis of epidemic data |
| Twitter-Analysis.nb | analyses mentions on twitter of 'coronavirus'; makes a wordcloud |
| WHO-situation-reports.nb | imports PDF files as images |
| bno-scraping-code.nb | data scraping from BNO website |
| cdc-media-images.nb | imports of CDC public domain images |
| china-geographics.nb | geographical plots for Chinese provinces |
| coronavirus-3d-models.nb | 3d protein models related to coronavirus |
| coronavirus-plots.nb | various coronavirus related plots and images |
| dna-graphs.nb | analyse fasta sequence as 3d graphs |
| fasta-sequences.nb | GenBank sequence analysis |
| genbank-sequence.nb | GenBank sequence analysis |
| geographical-data.nb | notebook to create the animation for the global spreading of the virus |
| github-repos.nb | analysis of coronavirus github repos |
## Results
### Hospital capacity
### Province graph
### Animation of global spread of Coronavirus
### Confirmed cases
Plot of confirmed cases of the Coronavirus
Log plot of confirmed cases of the Coronavirus
Confirmed cases for 2/4/2020:
### Images
GitHub topic wordcloud for Coronavirus:
### 3D Models
Protease ribbon (source: https://3dprint.nih.gov/discover/3DPX-012893):
Protease surface (same source):
