https://github.com/becksteinlab/vesicle_library

library of vesicles with the Dry Martini force field
https://github.com/becksteinlab/vesicle_library

Last synced: 10 days ago
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library of vesicles with the Dry Martini force field

• Host: GitHub
• URL: https://github.com/becksteinlab/vesicle_library
• Owner: Becksteinlab
• Created: 2015-09-30T21:11:38.000Z (about 9 years ago)
• Default Branch: master
• Last Pushed: 2016-05-30T04:39:42.000Z (over 8 years ago)
• Last Synced: 2024-03-25T23:15:55.167Z (8 months ago)
• Homepage:
• Size: 52.4 MB
• Stars: 5
• Watchers: 1
• Forks: 1
• Open Issues: 1
• Metadata Files:
  • Readme: README.md

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README

        
# vesicle_library

Vesicles with the [Dry Martini](http://www.cgmartini.nl/index.php/299-dry-martini-beta) forcefield [1], constructed in 

varying sizes, ranging from 10 nm to 30 nm radius. Results are summarized in a technical report [2]. All data are made available under the CC-BY license.

A set of large vesicle systems, ranging in size from 1.75 M to 10 M particles are made available under doi:[10.6084/m9.figshare.3406708](https://doi.org/10.6084/m9.figshare.3406708).

1. Clément Arnarez, Jaakko J. Uusitalo, Marcelo F. Masman, Helgi I. Ingólfsson, Djurre H. de Jong, Manuel N. Melo, 

Xavier Periole, Alex H. de Vries, and Siewert J. Marrink.

Dry Martini, a Coarse-Grained Force Field for Lipid Membrane Simulations with Implicit Solvent. J. Chem. Theory Comput.,

2015, 11 (1), pp 260–275. doi: [10.1021/ct500477k](http://doi.org/10.1021/ct500477k)

2. Kenney, Ian M.; Beckstein, Oliver (2015): Technical Report: SPIDAL Summer REU 2015: Biomolecular benchmark systems. 

figshare. doi: [10.6084/m9.figshare.1588804](http://dx.doi.org/10.6084/m9.figshare.1588804)

 Vesicle Library by Ian M. Kenney, Oliver Beckstein is licensed under a Creative Commons Attribution 4.0 International License. Based on a work at https://github.com/Becksteinlab/vesicle_library.