https://github.com/ctsit/nacculator_utils

These are tools that facilitate the use of Nacculator
https://github.com/ctsit/nacculator_utils

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These are tools that facilitate the use of Nacculator

• Host: GitHub
• URL: https://github.com/ctsit/nacculator_utils
• Owner: ctsit
• License: apache-2.0
• Created: 2018-05-16T19:15:50.000Z (over 6 years ago)
• Default Branch: master
• Last Pushed: 2021-03-19T23:29:56.000Z (almost 4 years ago)
• Last Synced: 2023-08-19T18:13:22.220Z (over 1 year ago)
• Language: Python
• Size: 385 KB
• Stars: 2
• Watchers: 5
• Forks: 3
• Open Issues: 3
• Metadata Files:
  • Readme: README.md
  • Changelog: CHANGELOG.md
  • License: LICENSE

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README

        
[![DOI](https://zenodo.org/badge/133712597.svg)](https://zenodo.org/badge/latestdoi/133712597)

# NACCulator Utilities 

This project is a suite of tools and utilities used to help run the 

NACCulator tool. As of this writing, they include a tool to automatically

pull data from REDCap and run the NACCulator filters, automatically 

downloading the list of subjects and their status found on the NACC website,

automatically taking the output of NACCulator and trying to upload it,

and finally parsing a NACC report and sending an email. 

## Getting Started

This project is not really meant to be used as a library just yet,

it mostly functions as a set of scripts or runnable containers. Currently,

there is no setup.py to just install it. 

To get started:

`git clone https://github.com/ctsit/nacculator_utils.git`

## Prerequisites

These tools were built and tested using:

  * python2

  * Docker CE 18.03.1-ce-mac65 (24312)

Please look at the requirements.txt file included for additional requirements.

Also, consider if you need to create a virtual environment for your setup.

The following commands are assuming you are in the top level directory and 

that virtualenv is installed.

`virtualenv venv -p=python2.7`

`source venv bin activate`

`pip install -r requirements.txt`

## Installing

There are seperate README files for the different parts of this project with more specific details.

## Versioning

We use SemVer for versioning. For the versions available, see the tags on this repository.

## Authors

Please look at the AUTHORS list to see the most up-to-date list of authors on

this project

## License

This project is licensed under the APACHE2 License - see the LICENSE file for details