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https://github.com/eeholmes/eeholmes


https://github.com/eeholmes/eeholmes

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# [E. Eli Holmes](https://eeholmes.github.io/) ![](https://visitor-badge.laobi.icu/badge?page_id=eeholmes.eeholmes) [![Github](https://img.shields.io/github/followers/eeholmes?label=Follow&style=social)](https://github.com/eeholmes)

Research Fisheries Biologist, Northwest Fisheries Science Center, NOAA Fisheries

Affiliate faculty, SAFS, University of Washington, Seattle

***

My eeholmes account has mostly sandboxy repos. To find my code and teaching products, look in the GH orgs that I contribute to (table below). For time series stuff: [ATSA book](https://atsa-es.github.io/atsa-labs/), [ATSA course](https://atsa-es.github.io/atsa/), [MARSS](https://atsa-es.github.io/MARSS/), [MARSS with Stan](https://atsa-es.github.io/atsar/).

| org |


| links | status |
| :---: | :---: | :---: | :---: |
| Applied Time
Series Analysis | [](https://atsa-es.github.io) | [](https://atsa-es.github.io) [](https://github.com/atsa-es) | [![GitHub org issues](https://img.shields.io/github/issues-search?label=open%20issues&query=org%3Aatsa-es%20is%3Aopen)](https://github.com/orgs/atsa-es/projects/1) |
| NWFSC
Time Series | [](https://nwfsc-timeseries.github.io) | [](https://nwfsc-timeseries.github.io) [](https://github.com/nwfsc-timeseries) | [![GitHub org issues](https://img.shields.io/github/issues-search?label=open%20issues&query=org%3Anwfsc-timeseries%20is%3Aopen)](https://github.com/orgs/nwfsc-timeseries/projects/1) |
| NWFSC
Math Bio | [](https://nwfsc-math-bio.github.io) | [](https://nwfsc-math-bio.github.io) [](https://github.com/nwfsc-math-bio) | |
| Fish Forecast | [](https://fish-forecast.github.io) | [](https://fish-forecast.github.io) [](https://github.com/fish-forecast) | |
| Rverse
Tutorials | [](https://rverse-tutorials.github.io/) | [](https://rverse-tutorials.github.io) [](https://github.com/RVerse-Tutorials) | |
| Ocean
Satellite Tools | [](https://github.com/ocean-satellite-tools) | [](https://github.com/ocean-satellite-tools) | |
| Upwelling project | [](https://github.com/UW-Upwelling-Project) | [](https://github.com/UW-Upwelling-Project) | [![GitHub org issues](https://img.shields.io/github/issues-search?label=open%20issues&query=org%3AUW-Upwelling-Project%20is%3Aopen)](https://github.com/orgs/UW-Upwelling-Project/projects/5) |

I am also a contributor to [NMFS OpenSci](https://nmfs-opensci.github.io), [Openscapes](https://github.com/openscapes), [NMFS Openscapes](https://nmfs-openscapes.github.io), [NMFS R User Group](https://nmfs-openscapes.github.io/NMFS-R-UG/) and [R-Govys](https://github.com/rgovys).

Finding my stuff: You can try searching by topic: `https://github.com/search?q=topic:+user:eeholmes&type=Repositories`. Topics: R, MARSS, jupyter, earthdata, remote-sensing, upwelling, teaching.


The repositories in my eeholmes GitHub account are scientific products and are not official communication of the National Oceanic and Atmospheric Administration, or the United States Department of Commerce. The scientific results and conclusions, as well as any views or opinions expressed herein, are mine and do not necessarily reflect the views of NOAA or the Department of Commerce. In addition, this account may have forked repositories that are not my work.