https://github.com/eweitz/degenome

Differential expression across the genome
https://github.com/eweitz/degenome

differential-expression pipeline

Last synced: 11 months ago
JSON representation

Differential expression across the genome

• Host: GitHub
• URL: https://github.com/eweitz/degenome
• Owner: eweitz
• License: cc0-1.0
• Created: 2020-01-07T11:24:30.000Z (over 6 years ago)
• Default Branch: master
• Last Pushed: 2020-02-01T13:34:20.000Z (over 6 years ago)
• Last Synced: 2025-06-01T13:02:57.907Z (about 1 year ago)
• Topics: differential-expression, pipeline
• Language: Python
• Homepage: https://degenome.readthedocs.io
• Size: 11.3 MB
• Stars: 2
• Watchers: 1
• Forks: 0
• Open Issues: 0
• Metadata Files:
  • Readme: README.rst
  • License: LICENSE

Awesome Lists containing this project

README

          
DEGenome – Differential expression across the genome

====================================================

|Build| |Coverage| |PyPI|

DEGenome transforms differential expression data into inputs for `exploratory genome analysis with Ideogram.js`_.

`Read the docs`_, and try the `DEGenome tutorial on Terra

`_!

.. |Build| image:: https://img.shields.io/circleci/build/github/eweitz/degenome.svg

  :target: https://circleci.com/gh/eweitz/degenome

.. |Coverage| image:: https://codecov.io/gh/eweitz/degenome/branch/master/graph/badge.svg

  :target: https://codecov.io/gh/eweitz/degenome

.. |PyPI| image:: https://img.shields.io/pypi/v/degenome.svg

  :target: https://pypi.org/project/degenome

.. _Ideogram: https://github.com/eweitz/ideogram

.. _Read the docs: https://degenome.readthedocs.io

.. _exploratory genome analysis with Ideogram.js: https://eweitz.github.io/ideogram/differential-expression?annots-url=https://www.googleapis.com/storage/v1/b/degenome/o/GLDS-4_array_differential_expression_ideogram_annots.json